RNA id: XM_043261187.1


Basic Information

Item Value
RNA id XM_043261187.1
length 2556
RNA type mRNA
GC content 0.43
exon number 3
gene id mrap2a
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 22763204 ~ 22767288 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttacGTTAAAGTTTAagtataacaaatatttttaagaataataatgtgacatatgcatatttgtgctttttgcaAACTCAAATTATTACTGATTTTTGGGTGACCTCTGAGcattttatacctttttttatgCTCTATAGTTGTCAGATTTGCTGCTTGAATTAGCATGTGTCGTAAATAACATTTGTCTCATTTACTGTGAGAAAAGTCCCAGGGCATTAAGCATCAGTCTGCTGCACAAATATGCACTAACATGTCTGACAGTTTCCTGAGCAGACTGCAGTATTCTTTATATTCTTGCctcagtgacattaaaacaggGTCACCTTGCATCTCCAATCAGGAGCCAGGAACAAGatataattcaaatgaatggTTATCTAGATGCATTAAAAGAGAATTTACCTTTTGGGTTCCCCCTATTCATAATATCAAACAAGAGCGGAAGTCCATTCAAAAATGTGCGAGGCTTCCGGTGTCAATTcgctcagtattttttttattttaaggtattgTCGTAATTATAAACACACCGATTTCTAGAGTAAATAGTTTTACCGTTTACTACATTTAGTTACTACTAATTAACCTATACATCGGCTAATCGGAAGTCTCGCGCATTAACAGAAAATAGCTTCCGCGCTGAAAAATACGTTTATAGTGTAACACagcggggcatgttgtcacaaacGAAACGCATGCCCGATGAGCCGTATTTTATTTCCCGGGCAATAACGTAAATGAAAGAGCTAGATTTTTAATTGCAACGAGATTTAGGTTAGTGCCCATGCGATTAAAAAAGGATTTACcgaaaatattaaagtaaaaaaaaaaaaaaaaccgctgtaaaatatgtaaagtaAGAAAGAAGCGCTCTCGGATGCCCCACGAGGCGCTTGAAATCTCTCAACTCACGCGCGAGCTGATGGATGAGAGAGATGCGTGATCTCATCATATATTCAGTGCGTTCTCTCGAGACCGCCGGAGCCCTCACGAGTAGCGGGTGTTACTTACAGAACGCCCACCTACACCACATTTTTTTGACTTTTGCCTTCGAACACGGCAGACGCGAGATGCTGGCTGGAAAAGGATGCTTTCTTTGGCAGTATCGGTGTTAAAACAGCTGCTTGCGTTCTCAGCTGTGGATGCAGCCGATGATCGTGTTGTAGCACCGACCGCTGCGAGAAATGTTTCACGTTCGCGCTGTGAGTCATGTTTCTCTTCCGTGAGCGCTCTTATTAGCAGTTTTGATCTGTGATTAAAGATGCCGAGGTTTCAGCATTTAAACAGCACTAGTATGCCGAATCACAATTATGAATGGAGCTACGAATACTACGACGACGAAGAACCCGTGTCTTTTGAGGGACTCAAAGCGCATCGATATTCCATTGTGATCGGCTTTTGGGTGGGTCTTGcggtttttgtcatttttatgttttttgttttgactcTTCTGACCAAAACAGGAGCACCACACCCTGAGGCCGCTGAGCCTTATGAGAAACGAATGCGTCTCACAAGCTGCGGCGAGGGTCTGGGCCGCCAACACGAGGCAGACACCAGAATGAGTCTCTCTCGGCCACTGCTGGAAGAGTCCCGCTCTTTTTTTCACTGTTACATAAACGAAGAAGAGCGAGAAGGAGGCAGGGCCACGGCTGGTGCCGCCCATGGACGTACCGGCAGCGGAGACTCCAGAGACCAAGTTGAAACGGTCGGCCTAGTCGTGCAAAGCATGGTCATGGACACCCGGGCAGAACGAGAGGCGGCACTGTTGGTGCATTTTAACATCCCCAACTTCGTGAACTCAGAACTGAACTCTGCGTTGGGGGAAGATGAAGATTTACTACTAGGCGATCCTCCGATCATAATGGACGAGGCCCGTCCGCGCTGTACCCATCATATCATCGACTAACCCACCAGTTCAaagatggactttttcactcaTTACGGCTccattattgtcttcagctcaGCCTGTGACCTTTAATAGTAAAGAGTGATGGTGTTTCGCTTCAAAAGTTCTGCTTTTGCAGCGCACGCTTCAAGGCTGAGCTATTTTCTGACATCTGGGGTCTACAGTGACTCATGATGTCAGTCCGCAAGATCAAAAAAAGATGGAATTGCACGACTGGGATTTGGCGAATGTGTTCTTGACAGCAGCAACAGCATGCTAAAAGACTGTTGGAAGAAAATggcagatattaaaaaaaaaaaaaagaaataattgacAACAATGCTGTTTCTGGTCGTAGGAAGAGATTCCGTAAAATGCAATGCCTTATTGGTTCATACTATcagcatgatttaaaaaaaaatctcttgatGTGCAGCAGGAAGATGCTTTATGCAGCATTGTACCTATGTAGCCTAATGGCAAAATTACTGAAAATTGTCTGATTCTCTGGACTTGTTCTGTGAGCAAATGCTTGAGTAGAAAATAGCTCGCTGTCTGCACCTGTCGACTAAATCAGTGGCTTTCTGCAGAATATCTACAGAATACTTGCATACTAGCTCTCGGTATTTGTCTGAATACAGTTGTCTGAGCTGCTGAAGCAA

Function

GO:

id name namespace
GO:0006112 energy reserve metabolic process biological_process
GO:0048589 developmental growth biological_process
GO:0030818 obsolete negative regulation of cAMP biosynthetic process biological_process
GO:0040008 regulation of growth biological_process
GO:0097009 energy homeostasis biological_process
GO:0034394 protein localization to cell surface biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0031782 type 4 melanocortin receptor binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU170280 lncRNA downstream 79566 22683427 ~ 22683638 (-) True G115335
TU170171 lncRNA downstream 526138 22230240 ~ 22237066 (-) True G115262
TU170039 lncRNA downstream 889153 21873826 ~ 21874051 (-) True G115170
TU170024 lncRNA downstream 937767 21825198 ~ 21825437 (-) True G115155
TU169974 lncRNA downstream 1149025 21605980 ~ 21614179 (-) False cenpw
TU170525 lncRNA upstream 6478 22773766 ~ 22774032 (-) True G115496
TU170565 lncRNA upstream 118427 22885715 ~ 22888001 (-) True G115536
TU170567 lncRNA upstream 124818 22892106 ~ 22901138 (-) False cdc42se1
TU170586 lncRNA upstream 143591 22910879 ~ 22911323 (-) True G115548
TU170604 lncRNA upstream 191396 22958684 ~ 22960933 (-) True G115559
XM_043262106.1 mRNA downstream 239454 22419870 ~ 22523750 (-) True tsnare1
XM_043262107.1 mRNA downstream 239454 22420799 ~ 22523750 (-) False tsnare1
XM_043261609.1 mRNA downstream 412161 22347650 ~ 22351043 (-) True snrnp48
XM_043261611.1 mRNA downstream 419104 22335163 ~ 22344100 (-) True zgc:113232
XM_043261610.1 mRNA downstream 431170 22330179 ~ 22332034 (-) True cd83
XM_043261382.1 mRNA upstream 11947 22779235 ~ 22797020 (-) True plekho1b
XM_043261414.1 mRNA upstream 45281 22812569 ~ 22815095 (-) True si:dkey-23o4.6
XM_043261867.1 mRNA upstream 124814 22892102 ~ 22901187 (-) True cdc42se1
XM_043260054.1 mRNA upstream 148679 22915967 ~ 22929917 (-) True LOC122359864
XM_043260164.1 mRNA upstream 210637 22977925 ~ 22982891 (-) True LOC122359931
TU170138 other downstream 674150 22087649 ~ 22089054 (-) False eny2
TU170105 other downstream 794669 21964855 ~ 21968535 (-) True G115207
TU170018 other downstream 959400 21801475 ~ 21803804 (-) True G115149
TU170010 other downstream 1058245 21704018 ~ 21704959 (-) True G115141
TU169980 other downstream 1201988 21560221 ~ 21561216 (-) False G115116
TU170599 other upstream 165339 22932627 ~ 22933967 (-) True G115554
TU171080 other upstream 752520 23519808 ~ 23524382 (-) True G115882
XR_006252802.1 other upstream 820897 23588185 ~ 23609841 (-) False usp45
TU171098 other upstream 902610 23669898 ~ 23675298 (-) False mchr2a
TU171232 other upstream 1559419 24326707 ~ 24327973 (-) False phactr4b

Expression Profile