RNA id: XM_043261275.1


Basic Information

Item Value
RNA id XM_043261275.1
length 2400
RNA type mRNA
GC content 0.50
exon number 7
gene id ppp1r8b
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5355987 ~ 5360418 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctttttaatatttatgagccGGAAGACGATCCGGTTTGAGTAGATTACCCAAGATGCTCGGCGTGCTTGTAGCAGGGGGGAATGCGTGACAATGGCAACAAATACTACAGCAAATAACCCATCTTTCGATTGTCCATcatgGGCAGGGAAGCCTCCAGCGGGACTGCATTTGGACGTGGTGAAAGGAGACAAGCTAGTCGAGAAACTGATCATCGATGAGAAGAAGTATTACTTGTTCGGGAGGAACCCGGACGTCTGTGACTTCACCATCGATCATCAGTCGTGCTCTCGGGTGCACGCGGCCCTCGTCTACCACAGGCATCTGAAAAGAGTGTTTCTCATCGACCTCAACAGCACACATGGCACGTTCCTCGGACACATTCGCCTGGAGCCCCACAAGCCCCAGCAGGTTCCCATCGACTCCACCATGTCGTTCGGCGCTTCCACGCGCGTTTACACCATTCGGGAGAAACCTCAGAGTCAGCCGGGCTCCGGCGTAGGGGACAGTAAAACCGGGGACGAAGAGGAGCTGAAGGGTCTTCTGGGACTTCCAGAGGAAGAAACTGAGCTGGAGAACCTGACTGAGTTCAACACCGCTCATAACAAGCGCATCTCCACCCTCACCATAGAGGAGGGCAACCTGGATATTCAGAGACccaagagaaaaaggaagagctCCAGAGTGACCTTCAATGAAGACGATGAGATCATTAACCCAGAGGACATCGACCCCTCTGTCGGACGTTTCAGAAACATGGTCACAACAGCCGTGGTTCCCATTAAGaagaagaaaatggGCGGAGGCAACGCGCTGGGAATCGAGGAAACCATGACGCGACACATGCACACGTTCCCTTTGCAAGGTGGACTCTACAGAGACCTCCCCCCGGCCAGTCACGAAGCTCAGTCCCCGGGAGCTCCCGGCGGAGCCACCATCCTGGGAGGACTGCCGCTGCCGCTGCCCAACCCGGCCCCGGACGTAGACCTGGCCCAGGAGGCCCCGCCGCCTCCGCTCGTGCTCAACCCCACGCCGCTACCCGGCCCCTACGCCGCCGACCCGCTCAGTGAACCCCGCAAGAAGAAGTACGCTAAAGAGGCGTGGCCCGGCAAGAAGCCCACGCCGTCTCTGCTCATCTAGCCGCGTGTCGACACGCCACTCTCCTACGCTCACGAACTCTGTCTTGAAGCGTCTGGCAAACGGACTTGATCTCTCTCTACAAGAATCCGATTCGATGCgagaaattagttttaaaagatGACCTCGGCTCGCTCTCGTGTCACTCCAGGCGTGTAGTACTTACAGAACGCTACTTCCTCAAACGGATTCAATTGGTCCCAATcgttcgtttttgttttgtgctgctTGCACGTGATGCGCCGTTTCGTAGGAACCTTGCAATGACGTGAGGGTGAGCGAACGATTCAACGCGCTTCGAACGATTTGAAATGCCAGCTTGAAAGTGAGAGcctgatgaaaaacaaacacaagtgcATAACCAGATCCAGCAGAATATCACGTTTAGCCCAAGATGGCGGGGAGGAGGGGTTAACTTCTAcagtgtttttatgtaaaatgttctCGAAAACGTACCACTAGGCAGCAAGTTGTTTCAAACTAGCTGTTTGGCCACGCTTTTAGGAGCATCGTCAATCCAGATGATCACTTCGGTTTCAAAACCAAGGAAATTCTTCAATATCGTAACGCTTTACCGTGTGAagatctgtttttttctctctgtggtTTCACACTCTATTAGTTTCATACCCGTTCCCCTTTAATCCACGAAGCGAGGGCAGAGGTGTTCGCAGTGAACTGTTCGCTGACGGTTCATCAGGGCTCAATGTATACGGTCTtcactgttaaagaaaaaactgttttctaCTCCTGTTCTGTTTGGTACATTTGATGTTTGTACATATCATTCACAATAAAAGccagtgtatttttatatatttaaactgatGCCGGTTTAAGTCTTTACCTTTTGAATAGAGGTTCCTGTTTCGTATTCGTGACCGAGCTGTTCATTTTCTCCACAACTGGTTTGATGTCAAGATGTCAGCAGTCATGTGACTTGGGGTTTTTTGGTTCAACACCATGACGCTGATTATCAGAAGTCGTCCGTTCTGGCCTTTCATTGCTACAGCATGCCTTCACAAAAAGTCACCTTCCTGAGATACGCCGCCGCAAGCGGAAAAAGCGGTTTGGGATACCCGTGATGAATTACCTTTAACAGTTAAACTCGACTGTGACCGTGTCAACGAAGAAAACCTTTCCCGTGTCACTTCCTGTTAATCAGCACGCTCTATTTCTGGATACTGATGTCAAACCTGCGTTCGGTGGCTTTGGTTTGTCTGACTAGACGTGTTTTCCCgaaataaaatgcttatttttttgtc

Function

GO: NA

KEGG:

id description
K13216 PPP1R8, NIPP1; nuclear inhibitor of protein phosphatase 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU162462 lncRNA downstream 8428 5346405 ~ 5347559 (-) True G109942
TU162416 lncRNA downstream 34691 5247238 ~ 5321296 (-) True G109914
XR_006252732.1 lncRNA downstream 148568 5198791 ~ 5207419 (-) True LOC122359853
TU162406 lncRNA downstream 164637 5190781 ~ 5191350 (-) True G109907
TU162405 lncRNA downstream 165282 5190350 ~ 5190705 (-) True G109906
TU162481 lncRNA upstream 35712 5396130 ~ 5396354 (-) True G109953
TU162484 lncRNA upstream 36879 5397297 ~ 5397517 (-) True G109956
TU162464 lncRNA upstream 75414 5435832 ~ 5437067 (-) True G109944
TU162539 lncRNA upstream 215222 5575640 ~ 5581732 (-) True LOC122360242
XR_006252793.1 lncRNA upstream 216570 5576988 ~ 5578651 (-) False LOC122360242
XM_043260762.1 mRNA downstream 110429 5232211 ~ 5245558 (-) False vegfaa
XM_043260761.1 mRNA downstream 110526 5235903 ~ 5245461 (-) False vegfaa
XM_043260760.1 mRNA downstream 110553 5232211 ~ 5245434 (-) False vegfaa
XM_043260763.1 mRNA downstream 110590 5232211 ~ 5245397 (-) False vegfaa
XM_043260019.1 mRNA downstream 179175 5173650 ~ 5176812 (-) False rrp15
XM_043260026.1 mRNA upstream 6914 5367332 ~ 5379962 (-) True rpa2
XM_043261998.1 mRNA upstream 58055 5418473 ~ 5420640 (-) True tpbgb
XM_043260677.1 mRNA upstream 148199 5508617 ~ 5559896 (-) True bckdhb
XM_043260675.1 mRNA upstream 200063 5560481 ~ 5570782 (-) False ttk
XM_043260674.1 mRNA upstream 200063 5560481 ~ 5570782 (-) True ttk
XR_006252797.1 other downstream 110526 5232211 ~ 5245461 (-) True vegfaa
XR_006252796.1 other downstream 110527 5235646 ~ 5245460 (-) False vegfaa
TU162095 other downstream 1260483 4094757 ~ 4095504 (-) True G109724
TU161934 other downstream 2226008 3128061 ~ 3129979 (-) True G109600
TU161510 other downstream 4473235 882459 ~ 882752 (-) True G109287
TU162692 other upstream 456646 5817064 ~ 5818362 (-) False ndufa3
TU162864 other upstream 583803 5944221 ~ 5948789 (-) False LOC122359839
TU162885 other upstream 668790 6029208 ~ 6034777 (-) True G110208
TU162893 other upstream 736257 6096675 ~ 6099927 (-) True G110215
TU163014 other upstream 1721544 7081962 ~ 7083524 (-) True G110303

Expression Profile