RNA id: XM_043261427.1


Basic Information

Item Value
RNA id XM_043261427.1
length 2135
RNA type mRNA
GC content 0.42
exon number 10
gene id entpd3
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9904473 ~ 9914342 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctctcacacacacatccaaacaCAGTTACACATTCACAGTCTTGCACGTCTGGACAGAATGATCAATAAAGAGTCACAATCTTCAGACCACCTTACAACAGCCTCACGCAGAGGGGTGAGGATGGCAAAAGTGGCTATAGCTTTGGCCGCCGCCTTTATGCTGGCCAGCATAGCGGTCATCATATCTATAGCAGTTGTTCAAACTCATAAGAAGACATATATATCCCGTGGATTAAAgtaTGGTATTGTTTTGGATGCAGGCTCCTCCAGGACCACTGTGTATCTCTATGAGTGGCctgctgagaaagaaaacaacactgGGGTCGTGAGTGAGACCACAAAGTGTCAAGTTGAAGGCCCTGGAATCTCGGATCTTGGTAAAAATGGGGATCAggacaaaaaaacatggaaaagtTTAAAGGATTGCATAGCAAAAATAACCGAGGCCATTCCTTCCTATCGGCACAACTCGACCCCAGTCTTCTTAGGGGCAACAGCAGGGATGAGGCTTCTACAtaTGAAAGATGAAGAGACTTCCAACGCTATTCTGAAAGACATGAAGAAGTACCTTAGCTCTCTCCCTTTCAATTTTCAAAACGCTTCCATTATCTCTGGACAGGAAGAAGGCCTTTATGGCTGGATCACTGTCAATTACCTGAAGGGAAACTTCCTAGAGAAAAATCTCTGGAATGCCTGGGTGCATCCTCACGGGGCTGAGACAGTTGGCTCATTGGATTTGGGTGGAGCCTCCACCCAGATTGCCTTTGCCACTTCTGATGACGACAAAGGTGAAGATATCATTAAGGTTTCACTCTATGGCTATGAATACAACATCTATACTCACAGTTTCCTGTGCTATGGGAAAAATGAAGCTGAGAAGAGAGTTTTGGCCAGTATTGCAAAGaaatCCACCGACTGGACTAATCTGAAGCACCCCTGTTATCCCTCTGGCTATAATATCTCCATGGCTGCTGAGGAGGTTTTTGGCAGTGAATGTACAAAGAATGATCTTCCAACTAAGTATGACCTGAAGAGAAATATTACTTTCTTTGGACAGAGTAAGCCTGAACAGTGCAAAATTTTGGTCAGGAGTATCTTTAACCTAACATCCTGCCAGGGAGCTGAAAACTGTTCTTTTGATGGGGTTTATCAACCACCAGTCAGTGGAGACTTCATGGCTTATGCAGGCTTCTACTGGACCGCTTGGGCTCTTAAAGTGAATGGCTCCAAAAGTATGGAAACATTCAACATGAACATGCAAGCGTTTTGTTCAAATGACTGGAAAACTCTCAAGACATCCATCACATACATCAGAGACATCCATCTGAAGTCCTACTGTTACTCTGCAAATTATGTGCACAGCATTCTTGCAGATGGGTACAAGTTCAACACATTCAACTGGAAAAATCTCAATTTTCAGAAGGAGGTAAATAAGACCAGTATAGCCTGGTCCCTGGGCTACATGCTTACACTTTCCAACATGATCCCAGCCGAAGGAAAAATCATCAAGCTACCCATAAACAACGTCCTATTCACTGGGCTCCTCCTGCTGTTCTCTGCTCTGACTATCATCACCCTCACGTACTTAGTCATTGCACTGGTGCGCTTTTGTTATTGAGGTTTTTGTACTGAATTCTTGTCTATACTGCACTGAGTAGGACTAGTGTCCCACTTAGGGAGGTTTTGCAAACCAAGAAAGATGCTTGTGTGTCAATGCAGATGTACCTGCTAAAGaaagaatttaattttagatCCTGAAGGTCTTGAAGGTCCAGAGGTGCTAAGGTTAAAAAGAAGACACCTGATGATAACactaaatgtgtttaaaaccTGTATTGAATGTCATTCTGTCCAACAACAAAAAGGCGGTGTACAGGTCTTTTTAGTTCAGGAATGCCGAAGCAAAGTCTTGTACTGtggatttgaatgaaaacactaaagatagaaaataatttagcatataTACAATAAAGAGTATCTACTAGGTCATGACAATGTTTTGATTGTGTATTGTATCTAATGTTTGTCTCATTCAATTGCATCATCCCTTATGTATCATACGCGTGTATTTCTGCATGTGCTTTCCAGCACACGTTGTCTTTGAATGAAATATGTCATAGTACTCTAAATAAATC

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01510 ENTPD1_3_8, CD39; apyrase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164074 lncRNA downstream 1492 9889071 ~ 9902981 (-) False gask1a
TU164073 lncRNA downstream 16244 9879635 ~ 9888229 (-) False gask1a
TU164072 lncRNA downstream 28809 9875392 ~ 9875664 (-) True G111097
TU164002 lncRNA downstream 149493 9754315 ~ 9754980 (-) True G111048
TU163998 lncRNA downstream 227968 9674864 ~ 9676505 (-) True G111045
TU164327 lncRNA upstream 815826 10730168 ~ 10730415 (-) True G111298
TU164374 lncRNA upstream 877222 10791564 ~ 10793616 (-) True G111329
XR_006252847.1 lncRNA upstream 1009773 10924115 ~ 10924764 (-) True LOC122361039
TU164468 lncRNA upstream 1245497 11159839 ~ 11160056 (-) True G111393
TU164502 lncRNA upstream 1310844 11225186 ~ 11225409 (-) True G111420
XM_043261423.1 mRNA downstream 1659 9877211 ~ 9902814 (-) True gask1a
XM_043261431.1 mRNA downstream 45842 9818586 ~ 9858631 (-) False snrka
XM_043261430.1 mRNA downstream 46449 9818586 ~ 9858024 (-) True snrka
XM_043261435.1 mRNA downstream 117381 9778317 ~ 9787092 (-) True abhd5a
XM_043261852.1 mRNA downstream 189822 9705840 ~ 9714651 (-) True tcaim
XM_043260001.1 mRNA upstream 14994 9929336 ~ 9945606 (-) True ddc
XM_043260661.1 mRNA upstream 33009 9947351 ~ 10010750 (-) False grb10b
XM_043260658.1 mRNA upstream 33009 9947351 ~ 10010750 (-) False grb10b
XM_043260660.1 mRNA upstream 33009 9947351 ~ 10009178 (-) False grb10b
XM_043260659.1 mRNA upstream 33009 9947351 ~ 10009177 (-) False grb10b
TU163906 other downstream 631868 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 752290 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 1256918 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 1268251 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 1587788 8312265 ~ 8316685 (-) True G110556
TU164366 other upstream 832451 10746793 ~ 10748300 (-) False LOC122361037
TU164396 other upstream 947609 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 947609 10861951 ~ 10866428 (-) False LOC122360812
TU164545 other upstream 1356322 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 1496336 11410678 ~ 11411777 (-) True G111490

Expression Profile