RNA id: XM_043261435.1


Basic Information

Item Value
RNA id XM_043261435.1
length 2170
RNA type mRNA
GC content 0.41
exon number 9
gene id abhd5a
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9778317 ~ 9787092 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctGGTTTGAACTGATTCACTCAAAAGATTCGACTCATTAGAACAATATTATGTTCACGATTCAGACATTGAACAACAAACAGTGTTAGAAACATGGCTGAGGAGACAGTGTTAGCGGGCACTGGACTGGCACAGCGTGTACTGATGTTACTTGGTATTCGTAGTTTCTTCTACAATGTTTTCAGTTTCTTGGACAAGACATTGAGATCATGGTGGATCACTGGCTGGCTGCCTTCATGGTGCCCAACATCACAGAGCCAACTGAAGGAAGCGGAAGAGAAGATGCTGCATTACATTACAAGCAAGTTCTGCAGGCAGTTTGTCCACATATCTGACAAAAACTCACTGTGGACATTGGTATTTAAGGGGCCAATGGAAAATAAGACCCCTCTGGTGTTGCTGCATGGATGGGGCGGTGTGGGACTCTGGGCGCTGAACCtggactctctctctcagcagaGGCCTGTTTATGCCTTCGACCTGCTGGGCTTTGGCCAGAGCAGCAGACCTCACTTTAACACAGATGCGCAGGAGGCTGAGCTCCAGTTTGTGGAGTCCATCGAACAGTGGAGGGAGAAACTGGGCTTGGAAAGTATGATTATGTTAGGCCATAACCTAGGAGGATATCTGGCTGCGTCCTACGCAATCACATACCCAAGCAGAGTAAAGCACCTGATTCTGGTGGAACCGTGGGGTTTTCCTGAGCGTCCTGACCCCGGAGACCAAGATAGACCCATTCCTGTTTGGATCAAAGCTATAGGGGCAATGTTGAGCCCGTTCAACCCTCTCGCCGGTCTAAGATTGGCTGGACCTTTAGGCCCTACTCTTGTGCAGACTCTGAGACCAGACTTCAAAAAGAAATTTGCAGCTGTGTTTAATGACAACAGAGTGACCGAATATATTTACCATCTTAATGTCCAAATACCAAGcggtgaaacagcctttaaaaacatGACCATTCCGTATGGCTGGGCAAAGAGGCCCATGCTGCAGAGAATTGGCCTGATTCACAACGACATCCCCATTACGGTGATCTATGGCTCACGCTCCAGCATAGATGGCCACTCCGGCAATTCAATCAAAGAAATGAGGCCAAACTCCCATGTAGAGATCATTGCCATACGAGGCGCAGGACACTATGCATACGCTGATCAGCCAGAGGATTTCAACCAGAAGATACTTCATGTCTGTAAAAGCACAAGCTGAAGAGTGATGATGAAGGTACAGGGTAACTGTCAGGAACTCTACACACATGGCTTTGTGCAGAACCTGTGAGCAGCAGATTATCTTCGTGGCAACCTAATTTTGGACCTGAGAGTTTGAAAGCCACGCGGTCTGCAAAGCAGATGTTCGTTTTGCACCactactgatttttttttaggcattttTAAGTTTGCACGTCACGTAATTGTTATGATTATCGGTATggaataatgtttatatttagaaaaaaaagcgTTCTTTGATtgtgataaaaataattatggtttattataaaatatacaccgTTTAGTGaatattagctttatttttatggaatTTATATAATCCACAGACAAAATTCGCCAAATTAGGCACTTAAATGAAATTATCATTAAAAGTCCCTTGTTAATCTTTttcaacaatattaatatttatatacactttttcatcttttgtgtttctattcattttataaatatgggcagcaataactgtattttagagcttttttgtttgttttctaccTCATGAAACTGTAAAATTGGATTAGAAGGGAGACAGACATGTGGAGCAACAGAAAGCATATGTGTTCTATGGtcattacattttcatgtaaatTCCTACgaaatcttttttaagtgcctcagttttttttaaacgtttataaATTTTGGCATTTAAAATCCGTCAAGCCCTGCAGGCCGGTGTTACAGTTTTCACAACAAGCCCCAGGTCACAGTCTGTTAAGTATTCaggcaaaataaatgcaatgcacGCTTTAGTGATAAATGGGCATTTTTTTAGGGAACAGTGATTTTTAATGTCAGTAATAATGTTAGACTGTCATACGGATTttgtaaataacatttgttcaaatttatattttgtctaATCTATTTTTCATGTGCCAACTCGGATGTCtattgttaattttaataataataaacttctTTTATGAGTCTCTTGAA

Function

GO: NA

KEGG:

id description
K13699 ABHD5, CGI-58; abhydrolase domain-containing protein 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164002 lncRNA downstream 23337 9754315 ~ 9754980 (-) True G111048
TU163998 lncRNA downstream 101812 9674864 ~ 9676505 (-) True G111045
TU163971 lncRNA downstream 154198 9623700 ~ 9624119 (-) True G111025
TU163969 lncRNA downstream 157864 9620119 ~ 9620453 (-) True G111024
TU163966 lncRNA downstream 171244 9599932 ~ 9607073 (-) True G111021
TU164072 lncRNA upstream 88300 9875392 ~ 9875664 (-) True G111097
TU164073 lncRNA upstream 92543 9879635 ~ 9888229 (-) False gask1a
TU164074 lncRNA upstream 101979 9889071 ~ 9902981 (-) False gask1a
TU164327 lncRNA upstream 943076 10730168 ~ 10730415 (-) True G111298
TU164374 lncRNA upstream 1004472 10791564 ~ 10793616 (-) True G111329
XM_043261852.1 mRNA downstream 63666 9705840 ~ 9714651 (-) True tcaim
XM_043261087.1 mRNA downstream 76050 9678223 ~ 9702267 (-) True trim71
XM_043261436.1 mRNA downstream 149271 9627246 ~ 9629046 (-) True ccka
XM_043260592.1 mRNA downstream 254320 9387510 ~ 9523997 (-) False ulk4
XM_043261431.1 mRNA upstream 31494 9818586 ~ 9858631 (-) False snrka
XM_043261430.1 mRNA upstream 31494 9818586 ~ 9858024 (-) True snrka
XM_043261423.1 mRNA upstream 90119 9877211 ~ 9902814 (-) True gask1a
XM_043261427.1 mRNA upstream 117381 9904473 ~ 9914342 (-) True entpd3
XM_043260001.1 mRNA upstream 142244 9929336 ~ 9945606 (-) True ddc
TU163906 other downstream 505712 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 626134 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 1130762 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 1142095 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 1461632 8312265 ~ 8316685 (-) True G110556
TU164366 other upstream 959701 10746793 ~ 10748300 (-) False LOC122361037
TU164396 other upstream 1074859 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 1074859 10861951 ~ 10866428 (-) False LOC122360812
TU164545 other upstream 1483572 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 1623586 11410678 ~ 11411777 (-) True G111490

Expression Profile