RNA id: XM_043261479.1


Basic Information

Item Value
RNA id XM_043261479.1
length 1149
RNA type mRNA
GC content 0.39
exon number 3
gene id kiaa1143
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21968837 ~ 21970707 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGGTTGCTTGAACGCAAACTTTACGCGCCAGGTTCTTGAGCGTTTAATGTTTGTAAACGCGTTCACGATTAATCAGACTGATTTGAACTGAAACACAATGAGTAAAAAGGGCAATGTGTCGTGGGTGAAGCCAGCCGAACCATCGTTCTTGAAGAAATTCAAGAATGATGTTGGTTTTAAAGAAGGACCGACAGTAGAGACTAAAAAGCAGCAGATGCCGCAGCTGGATGAAGACAGTGGTGACAGTGATCGGGAGGACGAGATGCCGCAGGTCGTGGTCTTGAAAAAGGGAGATCTGAGCGCTGAAGAGGTTATGGAAATCAAAAAAGATACAAAGGATTCAAACAAAGATGAACAGCCTCAACCGGATGGGAAGATCGTCTTTAAGAAGCCTGTCAAACGCTCTTCTGATAAATTTGAAGGCATTACCGCTAGCTCtagcaagaaaaagaaaagcgagGACGGTGAGAAGAAAGAGTCAAAAGCTGGCGTGAAGGTGAAGAACAACAGTCTGCTGTCTTTTGGTGGCGATGACGACGACGAGGAAGACTAGTTTGACGTGGATTCAAGCATCTCTTTGAGTCAGATTGTCTTGGACTGCTTCTTGCAAAGATCAATctgctcttttaaaaatgtatttctttgtgcgtgtgtgtaaaataGATGTTTGTAAAATCGGTCAAATCCATGCAGCttatttgttatcatttttaaaacatgcaagtTATTATGAGCCTCTGGAGCATCTTCAAAAGCTGGTAggacaaacaataaataatttcttcGGCATTATCGTAACTGTCATTAATGACACTTTTGAAAGATTTATGAAGATGATGGCTcgaaagagaaacaaaaacatttgtcaattaaaaatgcaaatatgataGAACATGGAGCAAAGAATTTGATTTCAAAGATGCTCTGAAGTTTCATAGAATCATTTTGAAATCCAACGGGATGTACAGATATGGCTTCTATGAAGGAGCTGTTCACTTTCCTTTTCCttgttttaggtttttgttttgcaaactgTTCACACTCAAAGTCCCTGATTCTGGGACGTTTGGGGTTGTatcttattattaaatacattttgaggaaagaaaaaaaaaaagcacattctgcaataaaatgtttttatcaccA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU170039 lncRNA downstream 94786 21873826 ~ 21874051 (-) True G115170
TU170024 lncRNA downstream 143400 21825198 ~ 21825437 (-) True G115155
TU169974 lncRNA downstream 354658 21605980 ~ 21614179 (-) False cenpw
TU169954 lncRNA downstream 579690 21388815 ~ 21389147 (-) True G115098
TU169865 lncRNA downstream 637479 21331012 ~ 21331358 (-) True G115051
TU170171 lncRNA upstream 259533 22230240 ~ 22237066 (-) True G115262
TU170280 lncRNA upstream 712720 22683427 ~ 22683638 (-) True G115335
TU170525 lncRNA upstream 803059 22773766 ~ 22774032 (-) True G115496
TU170565 lncRNA upstream 915008 22885715 ~ 22888001 (-) True G115536
TU170567 lncRNA upstream 921399 22892106 ~ 22901138 (-) False cdc42se1
XM_043261791.1 mRNA downstream 7346 21922962 ~ 21961491 (-) False osbpl10b
XM_043261790.1 mRNA downstream 7346 21922962 ~ 21961491 (-) True osbpl10b
XM_043260130.1 mRNA downstream 312117 21654319 ~ 21656720 (-) True hint3
XM_043260042.1 mRNA downstream 317726 21640097 ~ 21651111 (-) True trmt11
XM_043261465.1 mRNA downstream 354634 21605958 ~ 21614203 (-) True cenpw
XM_043260809.1 mRNA upstream 1965 21972672 ~ 21982802 (-) False zdhhc3a
XM_043260810.1 mRNA upstream 3785 21974492 ~ 21982803 (-) True zdhhc3a
XM_043261870.1 mRNA upstream 20567 21991274 ~ 22001056 (-) False sybu
XM_043261872.1 mRNA upstream 20567 21991274 ~ 22001055 (-) False sybu
XM_043261869.1 mRNA upstream 20567 21991274 ~ 22001055 (-) True sybu
TU170105 other downstream 302 21964855 ~ 21968535 (-) True G115207
TU170018 other downstream 165033 21801475 ~ 21803804 (-) True G115149
TU170010 other downstream 263878 21704018 ~ 21704959 (-) True G115141
TU169980 other downstream 407621 21560221 ~ 21561216 (-) False G115116
TU169979 other downstream 407777 21560221 ~ 21561060 (-) True G115116
TU170138 other upstream 116942 22087649 ~ 22089054 (-) False eny2
TU170599 other upstream 961920 22932627 ~ 22933967 (-) True G115554
TU171080 other upstream 1549101 23519808 ~ 23524382 (-) True G115882
XR_006252802.1 other upstream 1617478 23588185 ~ 23609841 (-) False usp45
TU171098 other upstream 1699191 23669898 ~ 23675298 (-) False mchr2a

Expression Profile