RNA id: XM_043261497.1


Basic Information

Item Value
RNA id XM_043261497.1
length 1168
RNA type mRNA
GC content 0.44
exon number 7
gene id tmem176l.4
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 27896728 ~ 27900760 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAATTAAAACTcctccttcaaaaaaaaaaaaaaaaaaaaaaattccccaaAAGCGTCGTGAAATTTCCTCTCCTCTGCACTGAGCCTCAGACGAGCCACGAAAGGTGAGTTAAAGGTTTGGCCATTGTTATCTACTGGAAGGTTCGAGTCCATCGCTCCCATCTTCGTCATGACCGTGACGGTGTCTCAGGGTGAAGGACTGACGGTCATCAGCGTCACCTCAAACCCAAAGAGCAAATGGCCCGTACTGTGTCAGATTCTGGGCTTTCTGTGCTACAGTCCAGTGTGCTCTGTATCTCAGGGTATGAAAGGGAAGCTGAAGGACGTCCACACAGCTTTTGGAGTTGTGCACATGATAATTGGCGTCCTCAATATTGTTGTGGGGATTGTGTTCATAAGTCTCGGGTTTTACTGGAACGTGTATATGATGGCCAACGGGCCCTTTTGGATTGGTAGTGTGtccATTGTAATTGGAATCGTATGCATCCTCATGGTGAAGTTTCCCTCTTCTTGTCTGctgaCAATTGGGATCATTCTGAATATAGTCAGTGCTGCATTCGCTATCACAGCTGTTGTACTGTACACAGTGGACGTGACAAATATGCATACAAGGTACAGCTGTGAAAGCCGCAGTTATGGCTATTCAAGTTACAACGTCTATGGTTATGATCCTGAAGAAAATCGGAGAAGAGAGCTGTGTCTGTACTACAGGAATGTCACCGAGATGGTCCTCAGAGGACTAGATATCATGATGATAGTGCTGTCGGTCCTTCAGATCTGCGTGAGCATCAGTTTCTGCGTGTTGACCGGGAAAGCTTTGTGCAAGAAGGAGGAAGATGAAAAGTCGGTGGAGGATCCAGAACTTGACAAGCCGCTGCTGGAAGACGCCGCCGCTGGTGCCGTGTGACgagataaacacacaaaaataatcaaaccTACTCTCTGTAATGCAATGGCATTTTGTGTCTCAGTATCGGAGTGAAATGGTTTAAAGCAGATCAGCTCCATTCACAACACTGCtaaattagatttgttttttccttttacaaaAGTGTCATCGTTGATCTTTCTTCATTTACAATAGCGGGTGTTgctttttattactttcttaattttttgtTGTGCTCTTTGgggctaaaaataaattacttcagCACTTTGGCATCAa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU172606 lncRNA downstream 189270 27706606 ~ 27707458 (-) True G116835
TU172605 lncRNA downstream 191794 27701126 ~ 27704934 (-) True G116834
TU172604 lncRNA downstream 219469 27675988 ~ 27677259 (-) True G116833
TU172603 lncRNA downstream 219869 27675988 ~ 27676859 (-) False G116833
TU172570 lncRNA downstream 284228 27612068 ~ 27612500 (-) True G116814
TU172656 lncRNA upstream 51808 27952568 ~ 27954707 (-) True G116865
TU172658 lncRNA upstream 59871 27960631 ~ 27961680 (-) True G116867
XM_043260926.1 mRNA downstream 202790 27690440 ~ 27693938 (-) False LOC122360376
XM_043260928.1 mRNA downstream 202888 27690440 ~ 27693840 (-) False LOC122360376
XM_043260927.1 mRNA downstream 203058 27690440 ~ 27693670 (-) True LOC122360376
XM_043260929.1 mRNA downstream 206608 27685267 ~ 27690120 (-) True LOC122360378
XM_043260930.1 mRNA downstream 206804 27685267 ~ 27689924 (-) False LOC122360378
XM_043261984.1 mRNA upstream 32314 27933074 ~ 27939751 (-) True mex3a
XM_043260134.1 mRNA upstream 65682 27966442 ~ 27971009 (-) False zmp:0000000881
XM_043260133.1 mRNA upstream 65682 27966442 ~ 27970007 (-) True zmp:0000000881
XM_043261721.1 mRNA upstream 190125 28090885 ~ 28127371 (-) True LOC122360891
TU172609 other downstream 91958 27792704 ~ 27804770 (-) True G116836
TU172608 other downstream 168784 27707716 ~ 27727944 (-) False G116836
TU172557 other downstream 269068 27623427 ~ 27627660 (-) False LOC122359885
TU172389 other downstream 316864 27520190 ~ 27579864 (-) True LOC122360079
TU172454 other downstream 535899 27358707 ~ 27360829 (-) True G116745
TU172659 other upstream 62728 27963488 ~ 27964958 (-) True G116868

Expression Profile