RNA id: XM_043261580.1


Basic Information

Item Value
RNA id XM_043261580.1
length 2730
RNA type mRNA
GC content 0.39
exon number 9
gene id LOC122360742
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15688497 ~ 15693259 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTATTTCCCCGCGGAAGTGGGCTACTTTGAAACAGGTGCATCAGGTTAAATTCATCTCACCTGAACCCGATTTTAGTCGAAAGACGAGACTGACAAAGGGAAACCCTTGGAAAAAACGCGCTtggtttagttttgtttagaaATCGGATGGTTTGGTTtcgcagacctggcaacccggAAAACTATGATAAGGGTTAATGTTGTTTACGAGCGTTTCACACAGTATGGGGAAGTTAGCAGTTGTCTCGCTAGCTGTTATTGCTCTGGCAGCTTTCGTGGGAGAAAGGATCGTTGCGCTTAGGCATGTGTTGCTTTACTCCAGAGAGCTTACACAAAACTACCTTCCTAGCTGCCAACTAATAGAGGGCATAGAGTATGGAGCTGAAGATATCACCATACTCGACGACGGGTTGGCTTTTCTGAGCACTGGCTTGAAGTATCCGGGCTTACCATCCTATTCAGATGACCCTGGGAAGATCTACACCCTGAATCTGTTGgattctaaaatgaaaattaaagcaCTGAAAATCAAGGGAGACTTTGACAAGGACTCTTTTAATCCGCATGGAATCAGCCTGTACACGGATGAACAAGATGGTGCTATATACCTGTTTGTTGTGAATCATCCTCAAGGCAAGAGTCAAGTGGAGATTTTCCGATTTATTGAGGATGAAAATGCTCTTCAGTACATCAAGACCATCAAGCATGAACTCCTACAAAAtgTGAATGATATAGTAGCTGTGGGGACCGAAAGCTTTTATGCCACCAATGATCATTACTTCACGAATGAGATTCTCAAGATGGTGGAGCGGTTTCTGTCTTTGCCCTGGTGTGACGTCGTCTACTACAGCCCTCAGACCGTGCAGGTTGTGGCGGGGGGGTTTCCGTCCGCCAACGGTGTAAATATCTCCCCCGACAAAAGGCATTTGTATGTGTCAAATATTATGAAGCACAAAATTAGTGTCAtggaaatacagaaaaacaccgTATTGTCTCACATAAAGGAGGTCGATGTGGGGTCACTCTGTGACAACATTGAGGTGGACCCTGAAACTGGAGATCTGTGGATGGGCTGCCACCCAAATGGCCTTAAATTTATGCTTAGTGATCCAAAAGATCCACCGGgctctgagGTTATCAAGATTGAGAACATCCTCTCTGAAGAGCCCAGGGTGACTCAGGTATATGCAGATGACGGCAGTGTGATCGTTGGTTCTTCGGTGGCAACACCATATGGAGGAAAGCTGCTCATAGGAACAGTTTATCAGAAAGCTCTGATCTGTGACTTTCATTTGTGAATATACTCGCTCACAGGGAAGAATAAATATTGGATCAAGTGTTTGAAAGAATTTGTCTAAATAGAGTGATTTTAAaggcaacacaaaacaaaagtcaaGGCCTTTTATAGGGTTTGAAATATAAATCCATATAATATCAATTTGGCTTAACCCAGATTGGGTTGAATTAGGAAGAATAAATACATAGGGCATTGGATAGGGTATATGATTTGAGATATTGGCgtttaacaaaattaaagaCTGGAAATGCTTATTATATTTGGCTTGTTGATCTCTGAATTGTCCGTTAGTGCCAacatttttgctgctttaaaaagattttaaataatttcttgtTCGCATTTCATTTGGGTAGAGTGCAACTTTTTGAGTCAACTTGTGATTTGATTTTACAATGTACAATTTTacaaagttatattttaatatgttgtcagtgaaaattaataattaatgagtGAACCTTACAAGCAATATTCCACCAAATGGATAGCTTGATAGTAACAGATAATACTGTAATGTGTCGGAAGTGTTTTAGATGTGTCTCTTCCTCACACAGGGTATAAGAGTTTAAAGGGGTCAcgtgatgttgctaaaaaaaacactatttgtgtatttggtgtaatgcaatgtgcttGTGTAGTTTAAGTTTTCAAAAAACTTACAtatgaatatttgaaaacaatCTGAATATTTGTGGAAAAGTGTTTGAAAAGTGATTTCTAGCTGTGCCCTCTTTTCgaaagcacaaagaaagtaatttaattttcacaacAACACGCAGCACATTGGGACTTTAGTCTTTGCCGCTTCAAGGATTTTATCTATGCAccaacagcttgtaacactacAAAGAGAAAGGAGAATTTGAAATTGCgtgatatgacccctttaaaaaaacaatttttgattGATAATACCAAGAATGCCCAAGTACCTTGCAAGTATAATTGAGAGCAGAGTGGAGATTTTATGCAAACTGTATACTGAAGAAAAGGAAGCCAGTGTGATAGTCACATGTTTTGGAAGAGAAAAGGCATCCAAGCCAAAGGGCTTTTTCTTGAAGACCAAAGCAGTCTGTGTTTAAAGCCATGCTACTAAAGCATTACTAGAAGTAGAAAATCGAATAATTgtagcctgtgtgtgtttgtttatatgagAAACAGTATcttttttgaaattgtaaataattaatggGCACTTTAATGCTGAGTGTGATTTAGTTGATAAGTTGATTACTCTGGAATCGTCCTTCTGTCCAATGAttagcacatttattttctgtgagTTCTGTGTATATGTTCAcgactgatttttatttttacacgaTAATGAAACGAATCAACTGTCAGCATTTTATGATTTGCATTTTACTTACACAAAATGCTGTGCATGATACCAAGTCGAGTGTTCATTAAAACCGACTGAAAAGAAA

Function

GO:

id name namespace
GO:0004064 arylesterase activity molecular_function

KEGG:

id description
K01045 PON; arylesterase / paraoxonase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU167104 lncRNA downstream 16378 15665236 ~ 15672119 (-) False fxyd6l
TU167105 lncRNA downstream 16378 15665236 ~ 15672119 (-) False fxyd6l
TU167106 lncRNA downstream 16378 15665236 ~ 15672119 (-) False fxyd6l
TU167108 lncRNA downstream 16378 15665236 ~ 15672119 (-) False fxyd6l
TU167109 lncRNA downstream 16378 15665236 ~ 15672119 (-) False fxyd6l
TU167130 lncRNA upstream 12564 15705823 ~ 15706059 (-) True G113179
TU167117 lncRNA upstream 16479 15709738 ~ 15717886 (-) True G113168
TU167138 lncRNA upstream 70210 15763469 ~ 15763745 (-) True G113187
TU167205 lncRNA upstream 212974 15906233 ~ 15906830 (-) True G113232
TU167204 lncRNA upstream 213840 15907099 ~ 15908673 (-) True G113231
XM_043261026.1 mRNA downstream 16346 15665236 ~ 15672151 (-) False fxyd6l
XM_043261035.1 mRNA downstream 16349 15665236 ~ 15672148 (-) False fxyd6l
XM_043261025.1 mRNA downstream 16350 15665236 ~ 15672147 (-) False fxyd6l
XM_043261032.1 mRNA downstream 16351 15665236 ~ 15672146 (-) False fxyd6l
XM_043261022.1 mRNA downstream 16352 15665236 ~ 15672145 (-) False fxyd6l
XM_043261582.1 mRNA upstream 505 15693764 ~ 15696605 (-) True LOC122360744
XM_043261581.1 mRNA upstream 6474 15699733 ~ 15704180 (-) True LOC122360743
XM_043261694.1 mRNA upstream 25904 15719163 ~ 15721123 (-) True negaly6
XM_043262060.1 mRNA upstream 28853 15722112 ~ 15724329 (-) True LOC122361102
XM_043260583.1 mRNA upstream 42014 15735273 ~ 15753910 (-) False kcnn4
TU167048 other downstream 192122 15468480 ~ 15496375 (-) False rps19
TU167050 other downstream 192122 15468480 ~ 15496375 (-) False rps19
TU167049 other downstream 192122 15492821 ~ 15496375 (-) True rps19
TU167051 other downstream 192775 15468480 ~ 15495722 (-) False rps19
XR_006252733.1 other downstream 774851 14909325 ~ 14913646 (-) False LOC122359907
TU167155 other upstream 123720 15816979 ~ 15819086 (-) True G113203
TU167180 other upstream 164340 15857599 ~ 15861893 (-) True G113220
TU167269 other upstream 319705 16012964 ~ 16013751 (-) True G113275
TU167253 other upstream 446060 16139319 ~ 16141235 (-) True G113267
XR_006252800.1 other upstream 525402 16218661 ~ 16228466 (-) False atxn1b

Expression Profile