RNA id: XM_043261581.1


Basic Information

Item Value
RNA id XM_043261581.1
length 1198
RNA type mRNA
GC content 0.43
exon number 9
gene id LOC122360743
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15699733 ~ 15704180 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGCATAAAAAGCGGACATGGCAACACTGAAGGGTTAGTTATATGTTTGTGCGCTAGAGGCAGTGCAAGAGTTTCAGACAGTATGGGTAAGTTAGCAGTTCTCTCGCTGTTTGCTGCAGCTCTTGCGATTTTGATCGGAGAAAGAACCATTACAGTAAGGCATTCAGTACTTTACTACAGAGAACTTACTCAGAACTACCTTCCAAACTGTCACCACATAGAGGGCATAGAATGTGGGGCTGAAGATATCACAATACTTGAAAATGGACTGGCCTTTCTGAGCACCTGCCTGAAACAACCAGCCTTACCATCCTATTCAGATGACCCTGGGAAGATCTACACCCTGAATCTGTTGgattctaaaatgaaaattaaagcaCTGAACATCAAGGGAGACTTTGACAAGGACTCTTTTAATCCGCATGGAATCAGCCTGTACACGGATGACAAAGATGGTGCTATATACCTGTTTGTTGTGAATCATCCTCAAGGCAAGGGTCAAGTGGAGATTTTCCAATTTATTGAGGATGAAAATACTCTTCAGTACATCAAGACCATCAAGCATGAACTCCTACAAAATATGAATGATATAGTAGCTGTGGGGACTGAAAGCTTTTATGCCACCAATGATCATTACTTCACGAATGAGATTCTCAAGATGGTGGAGAAATTTCTGTCTTTGTCCTGGTGTGAAGTTATCTACTACAGCCCTCAGACCGTGCAGGTTGCGGCAGGGGGCTTCTTGCTTGCCAACGGCATAAATATTTCTCCAGACAAAAGGCATTTGTATGTGGCAGATCTTCTGAAGCACAAAATTGTTGTCTTGGAAATACAGAAAAGCGCTGTATTGTCTCATGTAAAGGATGTTGTTGTGGGGTCACTCTGTGACAACATTGAGGTGGACCCTGAAACTGGAGATCTGTGGATGGGCTGCCACCCAAACGGTCGTAGTTGGGTACTACAAGATCCAAATGAACCAGTTGGTTCTGAgGTTATCAAGATTGAGAACATCCTCTCTGAAGAGCCCAGGGTGACTCAGGTATATGCAGATGACGGCAGTGTGATTGTTGCTTCTTCAGTGGCAACACCATATGGAGGAAAGCTGCTCATAGGAACAGTTTATCAGAAAGCTCTGATCTGTGACCTTAAGTAGTGTATTTACTGGaaagaataaatatttgctCAGCTGTTTAAAAGA

Function

GO:

id name namespace
GO:0004064 arylesterase activity molecular_function

KEGG:

id description
K01045 PON; arylesterase / paraoxonase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU167108 lncRNA downstream 27614 15665236 ~ 15672119 (-) False fxyd6l
TU167130 lncRNA upstream 1643 15705823 ~ 15706059 (-) True G113179
TU167117 lncRNA upstream 5558 15709738 ~ 15717886 (-) True G113168
TU167138 lncRNA upstream 59289 15763469 ~ 15763745 (-) True G113187
TU167205 lncRNA upstream 202053 15906233 ~ 15906830 (-) True G113232
TU167204 lncRNA upstream 202919 15907099 ~ 15908673 (-) True G113231
XM_043261582.1 mRNA downstream 3128 15693764 ~ 15696605 (-) True LOC122360744
XM_043261580.1 mRNA downstream 6474 15688497 ~ 15693259 (-) True LOC122360742
XM_043261024.1 mRNA downstream 28742 15665236 ~ 15670991 (-) False fxyd6l
XM_043261694.1 mRNA upstream 14983 15719163 ~ 15721123 (-) True negaly6
XM_043262060.1 mRNA upstream 17932 15722112 ~ 15724329 (-) True LOC122361102
XM_043260583.1 mRNA upstream 31093 15735273 ~ 15753910 (-) False kcnn4
XM_043260582.1 mRNA upstream 31093 15735273 ~ 15753910 (-) True kcnn4
XM_043260584.1 mRNA upstream 50001 15754181 ~ 15759667 (-) True si:dkey-79d12.5
TU167048 other downstream 203358 15468480 ~ 15496375 (-) False rps19
TU167050 other downstream 203358 15468480 ~ 15496375 (-) False rps19
TU167049 other downstream 203358 15492821 ~ 15496375 (-) True rps19
TU167051 other downstream 204011 15468480 ~ 15495722 (-) False rps19
XR_006252733.1 other downstream 786087 14909325 ~ 14913646 (-) False LOC122359907
TU167155 other upstream 112799 15816979 ~ 15819086 (-) True G113203
TU167180 other upstream 153419 15857599 ~ 15861893 (-) True G113220
TU167269 other upstream 308784 16012964 ~ 16013751 (-) True G113275
TU167253 other upstream 435139 16139319 ~ 16141235 (-) True G113267
XR_006252800.1 other upstream 514481 16218661 ~ 16228466 (-) False atxn1b

Expression Profile