RNA id: XM_043261662.1



Basic Information


Item Value
RNA id XM_043261662.1
length 696
RNA type mRNA
GC content 0.40
exon number 3
gene id LOC122360801
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8834699 ~ 8835602 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGGGTTCAGATGTCCCCAGCAGTCACATACTGCTGATCGTAGCCTGTCTGTTAAATGCACTTGCTCCGATTCTATCAGTCAACAGAGGCGGAGAGTGCACATTCAACACCAAAGGCACCTGTGAATATCAAGGACAGGTCTTTGGCATTGGCGAGAGCTGGATTACTAAAGACTGctaccagtgtgtgtgtatggagcCCTTCGGGGTGGGCTGCTGCGATCACAACTCCCTACCAGTCGATTATCCTGAGTGGTGTGAGGTCATCAGAAAGCCCGACTCCTGCACCGGCGTGGCTGTGATGAGAGCCAATCACAAACTACCTTGTCTTTATGGGAAGTGGGGCGGGATACGACCTGAGACATGGAAGTCCGATAacgatttattgttttaaatgaagtgttaaaataaaaataaactttttttttggttctctGCATCAAAGGATAACTCTGGTTTCAAATATGTTGACACTGATGTTCAAAACCAATATAATACCCCCTATAGCTTTATCTGTTTAAATAAGGCTGCTgtgcacattatttattttgtgatataattctcagtcatttattatttaacttcaCTGAGAGTTTTTCTAATAAATGGAACATGCCACtttataaaactgcatttaataacaatgtCATTTCCATTATCATTTCTTTATGTTCTCtaaataagaattaaatttaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163638 lncRNA downstream 244065 8589898 ~ 8590634 (-) True G110773
TU163610 lncRNA downstream 283147 8547782 ~ 8551552 (-) True G110753
TU163615 lncRNA downstream 283147 8547782 ~ 8551552 (-) False G110753
TU163331 lncRNA downstream 595523 8237758 ~ 8239176 (-) True G110548
TU163329 lncRNA downstream 598906 8234908 ~ 8235793 (-) True G110546
TU163682 lncRNA upstream 9923 8845525 ~ 8845993 (-) True G110807
TU163727 lncRNA upstream 165185 9000787 ~ 9001428 (-) True G110836
TU163733 lncRNA upstream 168936 9004538 ~ 9005206 (-) True G110842
TU163741 lncRNA upstream 171695 9007297 ~ 9007532 (-) True G110849
TU163744 lncRNA upstream 195533 9031135 ~ 9031449 (-) True G110852
XM_043261271.1 mRNA downstream 819 8821665 ~ 8833880 (-) True si:dkey-17m8.1
XM_043260417.1 mRNA downstream 29586 8796757 ~ 8805113 (-) False ccdc106a
XM_043260418.1 mRNA downstream 29586 8796757 ~ 8805113 (-) False ccdc106a
XM_043260416.1 mRNA downstream 29773 8796757 ~ 8804926 (-) True ccdc106a
XM_043261437.1 mRNA downstream 54676 8774595 ~ 8780023 (-) True m6pr
XM_043262104.1 mRNA upstream 5892 8841494 ~ 8844824 (-) True zgc:174935
XM_043262059.1 mRNA upstream 21862 8857464 ~ 8862529 (-) True LOC122361100
XM_043261561.1 mRNA upstream 102945 8938547 ~ 8944648 (-) False tapbpl
XM_043261560.1 mRNA upstream 102945 8938547 ~ 8944646 (-) True tapbpl
XM_043261997.1 mRNA upstream 110569 8946171 ~ 8957450 (-) False grhl2a
XR_006252934.1 other downstream 187144 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 198477 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 518014 8312265 ~ 8316685 (-) True G110556
TU163340 other downstream 532454 8298789 ~ 8302245 (-) True G110554
TU163327 other downstream 618104 8216029 ~ 8216595 (-) True G110544
TU163829 other upstream 310328 9145930 ~ 9152183 (-) True G110911
TU163906 other upstream 435369 9270971 ~ 9272605 (-) True G110974
TU164366 other upstream 1911191 10746793 ~ 10748300 (-) False LOC122361037
TU164396 other upstream 2026349 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 2026349 10861951 ~ 10866428 (-) False LOC122360812

Expression Profile