RNA id: XM_043261694.1



Basic Information


Item Value
RNA id XM_043261694.1
length 633
RNA type mRNA
GC content 0.46
exon number 5
gene id negaly6
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15719163 ~ 15721123 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGGCACAGCCTCTCCTCTTTGTTCTCATCAGTACACTTTTCTACAAAGCAAATACCCTGACCTGCTATCAGTGCATACCTGAGACATCAATTAAATGCACTGAAACTAAAGTGGAGTGTCCTGTCGGTCAGTGTGGGACTATGAGAACCACAACTTATATGGGAAACAACACATTGGCTGACATGATCATGAAGAACTGCTCTCAAGAGCATCAATGCGTGACTGCATCTGCAAACCTTGGAAGCACAAGAATAGTCATCAACAACCAGTGCTGCAATACTAACCTGTGCAATAGCCAGAACGAACTAGAATCCCCCAAGATGATCCCAAATGGAATGCAGTGCTTCACCTGCACCGGAGAAGACTGTGCATCAACTTTACCTTGCATTGATGAGGAAGATCACTGTATCAAAGCAACAGTTGTCAATGACAAACAGGTGATGACGTTGAAAGGATGTGTGACCAGAAGCTTTTGTATGGGTGACCTGTCCACCAAGATCGGTCAGTCCAGCATAACAGCGGACCAGAGCTGCTGTAAAGGTCATCTGTGTAACAGCGCTCACACAGCCGCTGCGAGCCGCTTCTTTCAGCTGGGCTTTCTCCTGTACGCCATGCTACAGAAAACACTTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU167117 lncRNA downstream 1277 15709738 ~ 15717886 (-) True G113168
TU167130 lncRNA downstream 13104 15705823 ~ 15706059 (-) True G113179
TU167108 lncRNA downstream 47044 15665236 ~ 15672119 (-) False fxyd6l
TU167138 lncRNA upstream 42346 15763469 ~ 15763745 (-) True G113187
TU167205 lncRNA upstream 185110 15906233 ~ 15906830 (-) True G113232
TU167204 lncRNA upstream 185976 15907099 ~ 15908673 (-) True G113231
TU167216 lncRNA upstream 190189 15911312 ~ 15946683 (-) True G113236
TU167209 lncRNA upstream 208099 15929222 ~ 15958664 (-) False G113234
XM_043261581.1 mRNA downstream 14983 15699733 ~ 15704180 (-) True LOC122360743
XM_043261582.1 mRNA downstream 22558 15693764 ~ 15696605 (-) True LOC122360744
XM_043261580.1 mRNA downstream 25904 15688497 ~ 15693259 (-) True LOC122360742
XM_043261021.1 mRNA downstream 48173 15665236 ~ 15670990 (-) False fxyd6l
XM_043262060.1 mRNA upstream 989 15722112 ~ 15724329 (-) True LOC122361102
XM_043260583.1 mRNA upstream 14150 15735273 ~ 15753910 (-) False kcnn4
XM_043260582.1 mRNA upstream 14150 15735273 ~ 15753910 (-) True kcnn4
XM_043260584.1 mRNA upstream 33058 15754181 ~ 15759667 (-) True si:dkey-79d12.5
XM_043260368.1 mRNA upstream 77963 15799086 ~ 15804702 (-) True has1
TU167048 other downstream 222788 15468480 ~ 15496375 (-) False rps19
TU167050 other downstream 222788 15468480 ~ 15496375 (-) False rps19
TU167049 other downstream 222788 15492821 ~ 15496375 (-) True rps19
TU167051 other downstream 223441 15468480 ~ 15495722 (-) False rps19
XR_006252733.1 other downstream 805517 14909325 ~ 14913646 (-) False LOC122359907
TU167155 other upstream 95856 15816979 ~ 15819086 (-) True G113203
TU167180 other upstream 136476 15857599 ~ 15861893 (-) True G113220
TU167269 other upstream 291841 16012964 ~ 16013751 (-) True G113275
TU167253 other upstream 418196 16139319 ~ 16141235 (-) True G113267
XR_006252800.1 other upstream 497538 16218661 ~ 16228466 (-) False atxn1b

Expression Profile