RNA id: XM_043261721.1


Basic Information

Item Value
RNA id XM_043261721.1
length 3177
RNA type mRNA
GC content 0.57
exon number 23
gene id LOC122360891
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 28090885 ~ 28127371 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGGATCTGACGGTCAGATCCAATAACTATAGTGTGCATTATAAAGTTAAAGCTGGCAGACTTATTCGCTCGCTGTCCTCTGAGAAAGAGAGCGCTTTGATTCACATTCCGCTGGGCTGCTCCGTCATCTGCAAACCTGTAAATGTCAGCAATTATTTAGACACACGCTCCGTTCTCCGCCGGCTGCATCGACTATCTGCCACTCGAGGTTCCAGCTGTCCTAACACCAGCGCCCTTCAGGAGGTGCGCGACTGTAATGAGCATCCCTGCATCGTGTATCACTGGCAGACGGGGCCCTGGGGACAGTGCGTGGAGGACACCACCACATCCACCCTCAACACCTCCTCCAGCGCGGACAGGTCCACCTGCACCATGGGTGTTCAAACGCGCAAGGTCATCTGCGTAAAAGTCAACGTCGGACAGGTGCCGCCCAAAAAATGTCCTGAAGCCCCCCGGCCGGAGTCAGTGAGACCCTGTCTGCTGCCCTGCAAGAGAGACTGTATAGTCACATCCTTCAGTGAATGGACAGAGTGCCCCACTTCCTGTGAAGCAGGTGTAAATGGGCAGAAGAATAAACAGTATCGCTATCGAGTGATCATCCAGATGCCAGCTAATGGAGGTCAGGAGTGTCCAGAAGTCCTTTATGAAGAGAAAGACTGTGCGactccatctgtctgtccgGGTTACAGGTGGAAAACGCACAAGTGGCGTAAATGTCAGCTGGTCCCTTGGAGCATCCGCAGGGACACTAAAGGAGCTCAGGAGAACTGTGGAGCTGGAGTCCAAACCAGAGCTATCTCGTGTAGGCAGCTGGATGGTACAGTGGCTGATGTGGTTCGGTGTCTGAAGTTTGCCAGCAGCATGCCGGTGATGAGCCAGCCCTGCCAGCTACCGTGTCGAGATGACTGCCAGCTCACCAGCTGGTCCAAGTTCTCTCCCTGCACCTCGGACTGCGTAGGGGTCCGTACGAGGAGGAGAGCTCTCGTGGGAAAAAGCAAGAAGAAGGACAAGTGCAAGAACAGCCAGATGTACCCGCTGAGCGAGACCCAGTACTGCCCATGTGACAAATACAACGCCCAGCCGGTGGGGAACTGGTCTGACTGCATCCTGCCCGAGGGCCGCGTGGAGAACGCCGCAGGCCTGAAGGTGTTGGGAGACGTGAGAGACGTGAAGGAGTGCGGGCAGGGCTACCGCTATCAGGCCATGGTGTGCTACGACCAGGACAACAGACTCGTGGAGACGGCACGCTGTAACAGCCACGGGTACATCGAGGAGGCCTGCATCGTTCCCTGCCCGTCTGATTGTAAACTCAGTGAATGGTCCAACTGGTCGCGCTGCAGTAAATCCTGTGGCAGCGGGGTCAAAGTTCGTTCGAAATGGCTCAGAGAAAAGCCTTACAATGGAGGAAGACCCTGCCCGAAACTGGACCACCTTAACCAGGCACAGGTGTACGAGGTGGTCCCGTGCGTCAGCGACTGCAGTCAGTATATCTGGGTCGCTGAACCCTGGAGCGTGTGGAAGGTCAGTAACGTGGATCTGAAGGAGAACTGTGGAGAGGGCGTTCAGACCAGAAGAGTCAGGTGTATGTTGAACACAGTGGACGGTCCCTCCGACGCAGTGGAGGACTATCTGTGTGATCCAGAGGAGATGCCGCAGGGGACGAGGGAGAGCCGTCTGCCCTGTCCCGAGGACTGTGTGCTGTCCGACTGGAGCCCCTGGACCCCGTGTGACCTGCCGTGTTCTGGAAGAGGAGACCGGGAGAGAGACGGCTTTGCGCTGCGTCTGCCTAAAGAAGGAGAGGACTGTCCGGTCAGCATGCAGACCGAGCCCTGCTTCCTGAACCGAAACTGTTTTCACTACAGCTACAACATCACCGACTGGAGCACATGCCAATTAAGTGCCAGCGCTGTGTGTGGAATCGGTCTCAAGACGAGGATGCTGGACTGCGTTAGAAGTGACGGCAAATCTGTCGACCTCAAGTACTGCGAGAAGCTGCGCTTGGAGAAGAAATGGCAGATGAACGCTTCCTGTACGGTGGAGTGTCCAGTCAACTGCCagctctctgattggtcagcatgGTCAGACTGCTCACAGACCTGTGGCCTTGAAGGGAAGATGTGGCGCAGACGGACGGTGGTTGAGGCGTCTCAGGGGGACGGCAGGCCGTGTCCGGCTCAGATGGAGCAGTGGAAGCCGTGTCCTGTGAGACCCTGCTACAGATGGCAGTACGGCCCGTGGTCCGAGTGCCGTGTCGAGgagGTGGTGTGTGGGGTGGGCCTGCGTTTCCGGAACCTGTCGTGCTTTGTATCAGATGGCTCCGGCGATGGGAAGAGCAGTATTGTAGAAGAAGAGCTCTGTGCTGGATTGGAGCAGGCTGTCGATGGAGATAAGAATATTGTTCTGGAGGAGACCTGCACCTTACCCTGCCctgGTGACTGTTACCTGATGGAGTGGTCCGACTGGAGCCCGTGTCAGAGTGTGTGCGTGAAGGGTCAGCGGTTGGACTTCAGTCCGGCTCAGGTCCGTTCTCGGGCCGTCATCGCTCAGGAGCCGGAGAACATCGCTCAGTGTCCCGATCAGGAGTGGCAGACCCGGCCCTGCAGCAATGGGGAGTGTTATGAGTACCAGTGGATGGGCAATCCTCAGCTGATCTGGTGTCAGCGCTCGGATGGAATAAACGTCACAGGTGGATGCCCTCCAGCGCTACTGCCAGGGACGGACCAGTCATGTGATCCGCCTTGTGACAAACCACAGTCATTTTGCTCAGAGgaaggcgtgtgtgtgtgcgaggagGGCTACACCGAGGTGCTCACGGCCGAGGGGATGCTGGAGCAGTGTGCTCCCATCCCTGTGCTCGAAATCCCCACCGCAGGGGACAAGAAATCTGATGTGAAGACCAGCAGGGCCATCAACCCCACCCTGCCCACCACAATACAGCCTGGCGCGCCGGGCATCACCTGGTACCTGCAACCCTTTGGACCAGACGGAAATGGTAACGGAGGCGCGGAGTTCCCCGGTAGTTTATCAGGTCACGATACCGCATGCTCGCACAGCAGTGTTGCCGTGGCCATTCGCTGCCGACGCCAGATTTCGCCAACAGCATGCGGCGGAGGTTGTCGCTCCATGAGCGATTTCCACCTGCCCAGGCGTCGCGTTGTCAGAGTCGGCGCCAGTTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU172658 lncRNA downstream 129205 27960631 ~ 27961680 (-) True G116867
TU172656 lncRNA downstream 136178 27952568 ~ 27954707 (-) True G116865
TU172606 lncRNA downstream 383427 27706606 ~ 27707458 (-) True G116835
TU172605 lncRNA downstream 385951 27701126 ~ 27704934 (-) True G116834
TU172604 lncRNA downstream 413626 27675988 ~ 27677259 (-) True G116833
XM_043260134.1 mRNA downstream 119876 27966442 ~ 27971009 (-) False zmp:0000000881
XM_043260133.1 mRNA downstream 120878 27966442 ~ 27970007 (-) True zmp:0000000881
XM_043261984.1 mRNA downstream 151134 27933074 ~ 27939751 (-) True mex3a
XM_043261497.1 mRNA downstream 190125 27896728 ~ 27900760 (-) True tmem176l.4
XM_043261496.1 mRNA downstream 190128 27896728 ~ 27900757 (-) False tmem176l.4
TU172659 other downstream 125927 27963488 ~ 27964958 (-) True G116868
TU172609 other downstream 286115 27792704 ~ 27804770 (-) True G116836
TU172608 other downstream 362941 27707716 ~ 27727944 (-) False G116836
TU172557 other downstream 463225 27623427 ~ 27627660 (-) False LOC122359885
TU172389 other downstream 511021 27520190 ~ 27579864 (-) True LOC122360079

Expression Profile