RNA id: XM_043261841.1


Basic Information

Item Value
RNA id XM_043261841.1
length 7685
RNA type mRNA
GC content 0.45
exon number 16
gene id pou2f2a
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14116537 ~ 14152861 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTCAATGTTGCGGACAGCGTGGATTCAGAGCGCGCGAGCGTATGGGAGGAGAGCGTGCACGAATGAGCTATTGGGGTTCCCAAATAACGGGAACAGGCAGACAGACCAAAACACGCAGGCGGATGGACGGAAATATAGGCAAGtgatcttaaaaaaaaccaGCGGCGTAACGAGCTCTTTTCCCCCTGATGTTTtcgtgctttatttatttgtttgccttATTTAGTCATGTATCGATTGATTGCGTTTTAATTACTGGCGTGTGACAAGGTGCGTGGGAGGAGGGGCGAATCCGGCGGACACGTTGAGTTGCCTTATTTTTCTATAGATGTTTGATTTCCAACGAGCAAAAATAAGCAGACGGTTTTAACCACGTTTTGCGACTTTGTGTTAAATGAATGTGTAGCCTTGTAGCTGCTAGGACAAGGAAGAGAGAAGAGCTAGACCAAAtaaattcaccaaaaaaatgcaCCACATATCCAAGTAATAACAACATCCGCTGTCTTTTTATACGTTATACGGTCAGGGTGtgaaatctttctttcttttttttctttattagaaCAAATGCAGAACCGTACGCTTATTTTACAAGCAGATAACCAAAGTTGAAGCGACTGCGACCAGGCCAGCTGAACACACAGCGGTCAGCGTCGAGGAGGACAGAAACACTCAGTTTACAACGGGAGATATGCATTTATAGATGTTCGCAAACATAGTCAATATATGCCTTTGAGTGACAGAAACATATACGTTCGGCGAGCAGGTCGAACAGTTATACCAAATACTGTAGCTGAATACCAAAACGAATAGACAAACGTGAAAGTAATAGCGAAATAACCCACGTTTCTCTTGTTTTAATCCGTCTATCCGCCTGTGTGCGCGCgctgggggaaaaaacacaGTCGGGCGGCGCGCGTCTGCGTATCTATGCATGTAGATAAAAAGTAAACTACAAGCGAAAAaggaaagcatttttatttaaaataacgtaACAGGAAGACCTACGCAAAAACGCAATTTTGTGAATAAGAAGGTATCGtgtccaacaacaacaaaaaaaaaacgcctgGAACCAAAGTGAGATAAAGCATCTTGCCACAACTACTAAAACTGCAAAGAAAAATCAACAGCAAAAAGAGCATCTGATCAGAACCAGACAAGAAGACGGATCATGTTTGTTCCTTTGCCGGTGCCGTTTGTCTTGCCGAGAACTGCCTCCGATCTCCACGCCTGGCGCCTCAAGTCCCCGCTGGCTCTGCGCTCTCACTCCGATATCAGAATGTCAAAGCCAATAGAGGTTGATAATCCAGCGGCAGACTCTCCGATGGAGAGCACAGACTCAGAAAGAAATGGCTCAGATTCAAATAATCAGGTTCAGCCAATGAAAATCagccctttctctctttctcccacaCTGAGCAGCAGCACCAAGACTAAGGTGGAGGACTGTAGTGAGATGTCTCCCGCTGTACAAACTCCACCCGCTCAGACAGCCCTTTCCCACACGCAGCTAATGCTAACGGGTGGCCAGCTCGCAGGGttgactgcacttttgccggCGCAGCAACAGCTGCTCTTACAGCAGGCGCAGCTCCTCGCCGCAGCTGTGCAGCAGTCGCATGTGGCCCACGCGGCCAATCAGCAGCAAGCCCAGCAGCAGGCAGCTCAGTCACAGAGCCAATCGCAGAGCACACAGGAACAAACCGCCGCCCCTGTCCCGCCCCCTCCTCCTCACCAGCTTCCTCTTTCTCAGCCAATCCAGCTCACTGCACAGgactTTCAGCAGTTGTTGCAGCTGCAGCAGTTAGTCCTCGTTCCAGGACACACTCAGCTTTCACCCGCACAGTTTCTTTTACCACAAACACAGCAAGGGCAGCAAGGGCTGCTATCAACGCCAAATCTAATTCCACTACCTCAGCAAAACCAAGGAAGCCTGCTGGCCGCTCCACACAGACTTAGTCTTCAAGCACAgACACTCAtgtcttgtgtgtgtggttcGTGGCAGAGGGAGAAGGCTGCAGAGAGCAGCGTGAACACAGTGACCCCGGTGACCGCTCACCCCGAGGAGCCCAGTGATCTGGAGGAACTGGAGCAATTTGCCCGCACATTCAAACAGAGAAGGATCAAATTGGGCttcacacagGGTGATGTGGGATTGGCCATGGGGAAGCTCTACGGGAATGATTTCAGTCAGACCACCATCTCTCGATTTGAGGCGCTCAATCTCAGCTTCAAGAACATGTGCAAACTCAAACCTCTGTTGGAGAAGTGGCTGACTGACGCAGAAACAATGTCGATGGACAGCACCTTGCCAAGTCCCAGTTCTCTTTCCTCTCCCTCGCTGGGGTTTGAGGGTTTGCCTGGCCGCCGCAGGAAGAAACGCACCAGCATTGAGACCAACGTCCGCGTCGCTCTGGAACGCAGCTTCATCACGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTCATCTCTGAAAAGCTCAACATGGAGAAGGAGGTGATCCGCGTCTGGTTCTGCAACCGCCGACAGAAAGAGAAACGTATTAACCCCTCCAGTGCCACCCCTCCCTTGCCCAGCCAACCCCAGCCCACCTCGCACAAACCCCCCTGCTACAGCCCGCACATGATGTCCAGTCAGGGACCATCGCAGACAGTGAGCAGTCTCGCTACAGCAGTGACCACTATGTCATCAGTTTGCCCTTTGACCCCAAGTGGACCGTCCTTAAGCTCTGCACCATCTCCTGTAACCCCGCCTCCCCGCAGTGATGCCAGCCCCGCTCCTCCTACTCACAGTACACTAAGTCTAAATGCAGGGAATACGGTGAGGGGAGTTAACACAGGAATGAACCAAGCTCTTCTTGGCAGCAACCCACTTGCTACTATCCAAGCTCTAGCAGCCAGTGGTGGCCAGCTGCCCATTTCCAGTCTTGAGGGCAGCAGCAAGGTGTTAATTGGTGGTTCGGGAGGCCAAGGAGCAGGTCTCCCCTCTTCCCTCTTTCTCAACCACTCCTCTTTGTTGCCCTTGGCAACAGGCACCGGCATGGGATTGGGCAGTTCAGCTCTTGCCAAAACCTCATTTCCTGTCACAGGCGGCATGAGTCCCTCCCCTTGCTCGAGCCCTGTCTCTTCCTGCTCTTCCGGCGAATTGCTACACAGCCCACACTCAATTGGAGGGGCTAAAATCGAGTGACGTTGCCCAAGGCCAATCAcgggaggaggagaaggaggagatgAAACCTTACCTGTCAACCAAAGCATCTCTTGATCCCCTCACTCTCTTTCATTTCCTCTCgttcacactctctctcttccgCTCTCTCACTCTACTGATGCCAAAAATATACAGAGTAGAAGAggggagagatggagagatggaGTGGAAGGAGGAAGGAGAAAGGGAAAACGaaaccaaaaaaacaccacGCGGCTTAGCTGGACGCAgccaaatacagaaataaatggaGAACAATAAACTATGTAGTGCAGTAAGAAGAGGACAAAAATAGATCCTTGAGCACCAAAAACAGCAAAGAGAACAAACTTTTACTGTGTGTTAAAGAACTCTTTGAAGCAAACGTGTGGAGTACTGAATACCAAAAAGTATATGGAACTCTGAGAGACTCactatgacaaaaaaaaaaaaataagcataccAAAATCTCAAATaccaaaaacaaacaccaaaaaTACGGATGGAAAAGCTTTATCCAAAGGACCTGTAAATAGCCAACCGTCCAGGACCAGACCCAGTGACAACAATCCAGCCATCACTGAGCACATCATCTCATCATCACTTCTTTCTTGCTtcgatttgtttttaaatatgagtgAGCCGGACTCCAAATGCTGTTGTGTTTCTCTGGTTCTTctccatttgtgttttttttttaatcagaagtAGCAGTTTTTTCATCTGTCTTTATTGAACGCTTCAGTACATATATAcgatcatcatcttcatcatcattccACGTCTTATCGAGCACATAGAGAGGATCGGGTGTTTGGTCTTTGATGCTCATCATATTAGCACTGCATAGCTTGATGCACTTGTTTGTCCAATGACATGAATGTCGTATAGTGTAACAGAAGTGAGACCAAGCTCCTCTCTAGCTTTCACACCTCTAGTTAAGTGTAAATACTCATTTCTCTCTTAATATTTAAGTGTTTGTATCCTTCCTCATTCCATTCCATGCCTCCCTCACTCACTTTCTCCCTTTTGAATACCAAAGCGAACCATTCATACATGATCAGTTCATAATTCACTTGATGCAGAAAGAGATTGGGGGCCCAAACCCTGACGAGGTCGCTCTGGGTAAGACAGCATGGCAACATGGCGAACTGTCATGGTGAAGGGGCTCCCATCCTCTCTGCTTCTTCTACAAGccaaaaatgaagcaaaacttCACAGCCAGCCAAACTTCCCATAAAggaaaaaccaaaaatgaaccAAGCCAAAAAACGGATGGAGGAGCAAAGTGAGTCGCTGTACAGAAAAAGAGTATCCCTTCATGCATCTCTGGACCGAGGTCACCGAGAACCATGTAGCAAGGGATCCGCCTCATCCTCCTGTCATTCAAACTTCCTGGTCCTGGGTGGCGGTATCTTTGATGACCTCACTGGACTCATCTGAAGAAGATGTTTCGGGTTCATTTGGGGGTTGGGAGGGTTGTTACTTTTGGTCTTTCGTTCCGTCTGTCTGTTTTGTGGGACTTTTCTTGGCTTTGTGTGTAGATTTATGTGCTTTCGTTTGGGGAAAAGCTATTCACGTATTTGCGAAAATCTCATTTTACGTTCCTTACTTGTTCCTATCTAGTTGTGTTAGAGAATCTAATCAGGTGGTTGAAACAATACTGTGAAAATTCAGTTCAACAGATAAAGAAACCAGGATAAACAACGCTCAAGTACATCCAAAGAACCAAAGTCGAGtataaacaagctttaaagAGAACCAAATATTACATACGCAACAATTTACATGCTCTCATCCACCTTACCGTTGTATTTATATCGTGCTGAAATCTGTAGTCAGTGAGCGCTGCAGGTTCAACGAGGGATGGATACATGAACTCAGTTCTCTACGTTACCGTATAGTCCGAATGGGTCAGTTAGTGCTTCTATAGATTTTGTAGTAAATGATCTATGTTATAATGCTTACTAATTGCTAATGTATGGaagaaaaacattgtgaaaagataaaaaaatgttgatatttacTTAGACCAAAAATTCACACTATCTCTCTTTTgggtttttgtgttttcttcctcccccattttaaaaaaaaatgatttttatgatttatttattttcctcttgCTCGTTTGTGAATTTCttaacagaacatttttattattattattattattaataataatattattatttatttaatatattccaGATGCTGTTTTGTAGTGGGTGTGTTTGAGGCACCAGATTGTATTCAAATGTAAACTTCCTTTGCCAAGGCGACCTTTCGAACCAAATCCATCTACAAATGCAACCGTCGGTCCTAAAGGGCCGGCCGCTAATCGACAGCGTAGGGGCCGGACACTTGTCTTCTCAACCTCTTAGCTGTTCCTTACTGGCAGAGCCTGTTGGGGGGGGGAAACCTATCAGGGGAAAAAGCAGCACTGTGTTTCTTCTGCCCAAATGTTGCGGTAGCAAGTAACCTTCCAGAGTAAAAGCACACACTGCCATGGCTTAGAAGGGATAAGGTCCTATAGGAACGTGCATTGTACGTACCTGTCTCGCCACTGCTGATGTTAGGGATagtgttgctatggttactgTCATGAAGACTACCACTTGTGATGGCGTCGAGCGCAGTGCTGCTGTGAGCCTTGACCTGAAAGCTTTAAACAGctacaaaaccaaaaactttAGGAGAGGAAAGATGGAGGGATTTGGGGTTCCTGGATAGGAAATACAGCAGAATGTATGTATTGTACGACAGAGGAAATGTATCAGTGCTCCATCTTCCTCTCTTTTTGCTCTCTGCCtcactcctcctcctctttgtCCTGTTTCTATTCCTGattagttttgtatttattttgtagcgtgtctgttgttctgtctccTGGTTAGGGGCGTAGAAGAGAGATAGTTCCTCATATACCTCACTCTCTTAAAGACAAACCAAATAGATGAATGCTTTAAAACAGAGAAGAAGGGGTCGAGGAGAAGTGCTTTGATAGGCCAGGGGACATTATGAAGATGAAAACACTCAAAGAACTTCACTGATGCTCTGGCACGTTAACTCCCTCGGACCCTGGGACCACTTTTCCAGTCACCAAACACAGAGCaggacacatacacacacccttTTCGTATATGTACATGCTTATTGTGCaagtgtatgtatataagtCAGAAAGGTGACTGAAGAGCAGGCGGCGACTGTTGTTGCTAGGTGACAAATTTTATAAAACGCAGGAGATGTTGAAGATGAACATAAGGGGAAGCCTTTCAGTCTTGCGTTATCTTTCCTCTAGCTTTCCTTCTTGCCGGTACAGTCAGGCGCAGTTCCGGACGTCTTAAAAACTTAACGATGCTGATATGCAAGTAATAGCCGCAGCGCAAGGGAGCGTGTTCAAAGTGCGAGTCTCTCAGTGGCGTGAATCTCCAGAGAATGATACCAAAGCAACACGTGATTCTGAGACCGAGCACCACACACACGCTCCCTAAAATCCTGCACACAATCCTCGAGTTTGATTCGCAgtgtttttcaatttattaattagtaACAATCGGATAGGGGTGAAAATCCCCgccaaaaaaaaacctgcaagaATGAGTCTTTTCGTTCTCATTTTACTCTCAACTTTCatctgctctttctctctctatattatacattcaaaaagaaaaaaaaacagcttcagTCCAAAGgtgtttaaaaagatttttagaagAACTTAAAACACGTCTAGTTAAACCAAAGAGCTACACGAACACATCCTCAGCCCTTTTCTTTCGTCTCTTTTCCTGGTCACCTAGCAACCCAGTTTCTGAAGGTATAACCTCAACTATCCAAAGTAACTTACGATGAAGATAACgatgaaatgtatatttttaattatccaTTATTTGGGGGGAAAACAAATCTTCGTtgtgatgatgacgatgatgatgatgatgatgatgatgatcttAAAGAAAAGACTTGGTATGTCTGTGATGAGTTTTCGTTTCCGTTCCTGGGGGGTTAGTGGTGTTAATCTGTCCCCTGAATCTTTTCCCTGATTTCATGTTCGCTGCTCACTCAGTGCGTAAACGAGAGCGCGTGGGTGCGTCATTGTCTGTGCGTGCATATGTTCATGTGAGAGTGGACGCGTTTTACACTCGAAATGCAGACGGATAATGCGGCTATTTTGGCACACGTGCGTGAATGCGTGCGTCTGTTTCGCTTGTTGGTGTACATCGTCATGTTTTTACCCTTTCCGTCGTTCCTTTTTTCCTCGCTTGAGTTGAGCAGttcctttttcttctctcctgtcctctgtgtctctttttctcCCTATGGTGACAGGTTAGCCTTTTGGTGTAATTATCTCTGAAACCAAAAAATAGTTGACAAGTAACTCGCTTGTTCATTGTACAGTGTTGttcatttaaagtcatttttgtaaCTGAAAGTGTTTCACTCATCTCAATAAAAACGGTAGAGAAAAAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU166006 lncRNA downstream 6075 14110148 ~ 14110462 (-) True G112464
TU165979 lncRNA downstream 206801 13909324 ~ 13909736 (-) True G112449
TU165978 lncRNA downstream 214924 13901137 ~ 13901613 (-) True G112448
TU165977 lncRNA downstream 215461 13900864 ~ 13901076 (-) True G112447
TU165937 lncRNA downstream 330084 13785015 ~ 13786453 (-) True G112426
TU166021 lncRNA upstream 55535 14208396 ~ 14210533 (-) True G112473
TU166022 lncRNA upstream 57832 14210693 ~ 14210939 (-) True G112474
TU166033 lncRNA upstream 139878 14292739 ~ 14296572 (-) True G112479
TU166037 lncRNA upstream 150263 14303124 ~ 14303535 (-) True G112483
TU166260 lncRNA upstream 175091 14327952 ~ 14328203 (-) True G112612
XM_043260680.1 mRNA downstream 13257 14060753 ~ 14103280 (-) True erfl3
XM_043260681.1 mRNA downstream 38071 14060753 ~ 14078466 (-) False erfl3
XM_043261355.1 mRNA downstream 58348 14020963 ~ 14058189 (-) False cicb
XM_043261354.1 mRNA downstream 58348 14020963 ~ 14058189 (-) True cicb
XM_043261392.1 mRNA downstream 104867 13998237 ~ 14011670 (-) True gsk3ab
XM_043259993.1 mRNA upstream 18307 14171168 ~ 14182105 (-) False dedd1
XM_043259990.1 mRNA upstream 18307 14171168 ~ 14182105 (-) True dedd1
XM_043259991.1 mRNA upstream 18307 14171168 ~ 14181771 (-) False dedd1
XM_043259992.1 mRNA upstream 18307 14171168 ~ 14181728 (-) False dedd1
XM_043261522.1 mRNA upstream 34380 14187241 ~ 14208217 (-) True atp1a3b
TU165859 other downstream 432628 13654060 ~ 13683909 (-) True zgc:92606
TU164609 other downstream 2704760 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 2830105 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 3233326 10861951 ~ 10883211 (-) False LOC122360812
TU166030 other upstream 81693 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 756464 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 1315619 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 1315619 15468480 ~ 15496375 (-) False rps19
TU167051 other upstream 1315619 15468480 ~ 15495722 (-) False rps19

Expression Profile