RNA id: XM_043261851.1


Basic Information

Item Value
RNA id XM_043261851.1
length 2202
RNA type mRNA
GC content 0.56
exon number 9
gene id fbxl4
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23527088 ~ 23536822 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGTGAAGCGGATGTTTATATTCCGCACCAACAGTGAAGAATGGGCGAGCAATGACAGCAGAAGTGAGAGATGGATCgagaacacagaacacactcaGCACAACACTCCAACACACCATTGCATCGTCTGTCATGCATGCAGCTTGGCCTATAGCCTGTACTGTCTAGATCCTATCGCGCTACAGCGCAAGGAAGAGAAAAGGGCTGTGCTTCCTGAATCAAACCCAGTCCTGCTGCTCCATGTTTCCTATGCTAACCCTTTTGAGCATGTTTTACTATATCTGTCTGCGGCGGCGCTCCAGGAGCGGGACACGGAGCGAGGCGTTGGGTAGCCGGCGGGCAGTGGAGCTGGGCCAGCGTTCTGCGCTGCCTGTCACCGTTGAGGTCGAGCAGTATGGCAAAGAGGTCCTGGACTTCAGTTCTCACTACGGCAGCGAGAACAGCATGTCCTATACCATGTGGAATCTAGCGGGCGTACCTAACGTCTATCCCAGCTCAGGAGACTTCACCCAGACCGCTGTGTTCCGGACTTATGGAAGCTGGTGGGAGCAGTGCATCAGCTCCTGTCAACGGTTCCGTCGTACGCCGCCTAGTTTCCACAGCCAGGACTACCTGGAACTGGCCTTCGAGGAGCCCGTCTATCCCACAGCCGTGGAGGTGCTGGAGACCTACCACCCCGGGGCCATTGTCAAGATCCTAGCGTGCTCGCTCAACCCTTTCTCCCAGAACCCTCCTGCTGATGTGAGGTGGGAGGTTCTGTGGGCGGCAAGCCCAACAAAGCTGACCCCTCAGGCTCGACAGTTCTCCCCCAGCATCAAGCAGATCAATTTTGCAACCAACCTGTTGCGTCTGGAAGTGAACAGCTCCGTTTTGGAATACTACACGGAGCTGGATGCTGTGATCCTGCGAGGCGTTCGGGAAAGACCTATTCTGGCCCTCTATAAGATCCCTGTCATCGACATCAATGATCTGAGTGACAGTGAAGAGGAGATCAGTGATGCAGGAGGCCTCTGCTGCAGGTCGGCTGGAGAAAACCGGCACAACTTGGGGAACGGCTACTTTGATAGGCTCCCTTATGAGCTAATCCAACTGATCGTGAGTCACCTGCCCGTTCCGGACCTGTGCCGATTGGCTCAGAGCTGCAAGCTTTTTCACAAACACTGCTGCGACCCGCTGCAGTACATTCAGCTCAGCCTGCAGCCGTACTGGGCCCGTCTCACAGACGCCTCTCTGAGCCACCTGCAAAGCCGCTGCACCCTCCTGCAGAGACTGAACATGTCCTGGACGGGCAACCGTGGAGCCGTGACGGCCACTGGATTCTGCAGCTTTATGAAGGCCTGTGGGGTGAGTCTGGTGTGTTTGGAGCTGTCGTGCTGCCATTTCCTGACTGAAGCGTGTTTAGAAGTGATCGCCCAGACGTGTCCGTGCCTCCAGGAGCTCAATTTGGCTTCCTGTGACCGTCTGCAACCTCAGGCCTTCAATCACATCGCCAAACTCACTAATCTACGCAGACTCGTGCTGTACCGCACCAAAGTTGAGCAATCAGCCATATTGAGCATCCTCACCTTCTGCCCAGAGCTGAAGCACCTTAACGTGGGAAGCTGTGTCATGATTGAGGACTATGATGTGGTGGCGAGTATGCTGAGCGCACGCTGCCGTTCTCTGCGCTCCCTCGACCTGTGGCGCTGCAGGAACCTTAGCGAGCGCGGTCTGGCAGAGCTGGTTTCGGGCTGCAGGCTCCTGGAAGAGCTGGACCTGGGTTGGTGCTCCACGCTTCAGAGCAGCTCCGGCTGCTTCCAGCACTTGGCCCGCAGTTTACCCCGCCTACGCAAGCTCTTCCTCACCGCCAACCGCACCGTGTGTGACTCTGACCTGGAGGAGCTGGCCGCTAACTGCAGCGCTCTGGAGCACCTTGATATACTGGgcaCACGGATGGTGAGCCCTGCCTCTCTGCGGAAGTTACTGCAGAGTTGTCCTCAGCTAAAGCTGTTGGACGTGTCCTTCTGCTCGCAGGTCGACTCTCGCTTCGTCCAGGAGCTCAGTGGCCTTTTCCCAAAGGTGTCCATCAAGAAGAGTTTCACTCAGTAAAACTCTGTGGGGTCCCGAGCAGGAGCAGCTTTACGGGGACGGTTTTTAAGACCCCAGGGAGAAGTGTGGCGCATGGTGCTGTGAACTTTCTGCCTTGAACTGCACGGAGCTGTGA

Function

GO: NA

KEGG:

id description
K10270 FBXL4; F-box and leucine-rich repeat protein 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU170758 lncRNA downstream 199195 23326208 ~ 23327893 (-) True G115669
TU170714 lncRNA downstream 337438 23185050 ~ 23189650 (-) True G115631
TU170695 lncRNA downstream 359148 23165193 ~ 23167940 (-) True G115621
TU170608 lncRNA downstream 449218 23074303 ~ 23077870 (-) True G115563
TU171122 lncRNA upstream 279075 23815897 ~ 23816157 (-) True G115910
TU171123 lncRNA upstream 280078 23816900 ~ 23817100 (-) True G115911
TU171127 lncRNA upstream 283697 23820519 ~ 23821825 (-) False G115914
TU171128 lncRNA upstream 283697 23820519 ~ 23821387 (-) False G115914
TU171126 lncRNA upstream 284030 23820852 ~ 23822288 (-) True G115914
XM_043261198.1 mRNA downstream 123458 23389423 ~ 23403630 (-) True mms22l
XM_043259987.1 mRNA downstream 158135 23367501 ~ 23368953 (-) True calhm6
XM_043259989.1 mRNA downstream 159715 23362337 ~ 23367373 (-) True calhm5.1
XM_043260514.1 mRNA downstream 165714 23358473 ~ 23361374 (-) True rwdd1
XM_043260512.1 mRNA downstream 179074 23339451 ~ 23348014 (-) True kpna5
XM_043260066.1 mRNA upstream 19953 23556775 ~ 23566844 (-) True faxcb
XM_043260068.1 mRNA upstream 30236 23567058 ~ 23572317 (-) True coq3
XM_043260065.1 mRNA upstream 36149 23572971 ~ 23579881 (-) False pnisr
XM_043260063.1 mRNA upstream 36149 23572971 ~ 23579881 (-) False pnisr
XM_043260064.1 mRNA upstream 36149 23572971 ~ 23579766 (-) True pnisr
TU171080 other downstream 2706 23519808 ~ 23524382 (-) True G115882
TU170599 other downstream 593121 22932627 ~ 22933967 (-) True G115554
TU170138 other downstream 1438034 22087649 ~ 22089054 (-) False eny2
TU170105 other downstream 1558553 21964855 ~ 21968535 (-) True G115207
TU170018 other downstream 1723284 21801475 ~ 21803804 (-) True G115149
XR_006252802.1 other upstream 51363 23588185 ~ 23609841 (-) False usp45
TU171098 other upstream 133076 23669898 ~ 23675298 (-) False mchr2a
TU171232 other upstream 789885 24326707 ~ 24327973 (-) False phactr4b
TU171647 other upstream 2130997 25667819 ~ 25676410 (-) False LOC122361130
TU172219 other upstream 2842850 26379672 ~ 26384187 (-) True G116604

Expression Profile