RNA id: XM_043261961.1


Basic Information

Item Value
RNA id XM_043261961.1
length 1662
RNA type mRNA
GC content 0.38
exon number 4
gene id LOC122361028
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10808337 ~ 10811017 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACATCACTGTCATACTTTACACCTCTGGGATTCTGATTATGAATTCTACAGCTGTGTCTCTGAGcGTGGTGTGGCACAACACAACACTGTCCAGTGTGGATGCTACAACTACTGAAAGTACTACAGAAGACTATTCTGGCTACTATGATGGAGATTTCGATTCGTCTGCATTGTCCTGCGTTTATGGAGAATATGGAGCCAGCATTCTTTCTGTGTTGTACTCCCTGTTTTTTGTGGTGGGCTTTCTGGGTAACGTACTGGTGATCTGGGTGGTCTTGATGGGTGTGAGGCTGAGAAGCATGACTGACATCTGTCTTCTGAACCTTGCTATTGCTGACCTGTTCTTGGTCTCTTCTCTCCCCTTCTTGGCACACTATGCCAGAAACCACTGGATCTTTGGAGATGTTATGTGCACTATAGTCCTTAGTGTCTACCACATTGGATTCTATAGTGGGATATTCTTTATTGTACTGATGAGTGTTGATCGGTACTTGGCtgtagttcatgctgtttttgccCTGAGAGTCAGAACAAGGACATACGGTATTTTAGCCAGTATGGTCATATggattatttcagttttggCATCCTTTCCTGAGTTAATTCACCTTAAAACCACGGAAAAAGATAATGCAACTTATTGTAGATCTTATCCAGCAAACGATCAAAATTCTAGTCATTATTCAAAGACTTTTGgtatcattaaaatgaatatcatgGGTTTAATTGTTCCGCTTTTTGTGATTGGTTTTTGTTACTCAATGATTTTGATGAGGCTCCTGACGGTTCGCTCTTCTAGGAGGCAGGCCATGCGTCTCGTCATTGCAGTGATGGTCGTCTTCTTCTGCTGTTGGGCTCCATACAATATTGTAGCTTTTGTGAAAGCCTTAGAGCTaaatgactttataactcaATCTTGTGACAGAAGCAAGGCAATCAATCTAAGTCTGCAGATCACAGAAGCTTTGGCTTATTCACACAGCTGTGTGAATccttttctttatgtatttgtgGGAGAGAAATTTAGAAGGCATCTTTTCAGACTCCTGCACAGAACACCCTTCAGTAGGCTGCAGTTCATGAAGAGTTACATCATACAGGCCACAGGATCTGTTTACTCACAGACCACTAGTGTGGATGAGAGATCAACTACAGCTGTttgaataaagtgttactgagaATAGAGAATACAGACAGaaataagtcaataaataaatgaatataggGTTTACTTGCATAGTGAAAAAAACCCTAATGCATCTACTGACAAACATTTTTCCACCGCCACccgaaaaaaatgtatagaaatgaaTGCAGTTTGTATATAAGCAGTTCGAGTGGAAGATTCATTGGAAAGTTGCAAGTACACAAGGCCAAGTTTTGAACAACTGgactgttaaaattaaaaacgcaGATCATACAATGTAATTCACAGGCCTTGTAGTGTTATTTGTGCATAtatctgtaaatgtttgtaattattttttatttaatgtttttcagaattgttgtttttctagTAACCAGTAActgttttttgtattaatgtatGAATATACGTGAATATACATCAGTTTGCACTGTTACAGAATTTTtgtgtttacttttttgtttatattttgttttaatgcatggcTTCAATAAAATGCATGTGACTGTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164374 lncRNA downstream 14721 10791564 ~ 10793616 (-) True G111329
TU164327 lncRNA downstream 77922 10730168 ~ 10730415 (-) True G111298
TU164074 lncRNA downstream 905356 9889071 ~ 9902981 (-) False gask1a
TU164073 lncRNA downstream 920108 9879635 ~ 9888229 (-) False gask1a
TU164072 lncRNA downstream 932673 9875392 ~ 9875664 (-) True G111097
XR_006252847.1 lncRNA upstream 113098 10924115 ~ 10924764 (-) True LOC122361039
TU164468 lncRNA upstream 348822 11159839 ~ 11160056 (-) True G111393
TU164502 lncRNA upstream 414169 11225186 ~ 11225409 (-) True G111420
TU164503 lncRNA upstream 414765 11225782 ~ 11226073 (-) True G111421
TU164527 lncRNA upstream 449728 11260745 ~ 11261048 (-) True G111437
XM_043261971.1 mRNA downstream 44032 10745576 ~ 10764305 (-) True LOC122361037
XM_043261967.1 mRNA downstream 220619 10571751 ~ 10587718 (-) True colec10
XM_043261969.1 mRNA downstream 238540 10553160 ~ 10569797 (-) False mal2
XM_043261968.1 mRNA downstream 238545 10553160 ~ 10569792 (-) True mal2
XM_043261956.1 mRNA downstream 386058 10408015 ~ 10422279 (-) True LOC122361025
XM_043261964.1 mRNA upstream 6874 10817891 ~ 10823189 (-) False LOC122361032
XM_043261963.1 mRNA upstream 6874 10817891 ~ 10820678 (-) True LOC122361032
XM_043261674.1 mRNA upstream 46503 10857520 ~ 10883424 (-) True LOC122360812
XM_043261367.1 mRNA upstream 522158 11333175 ~ 11386993 (-) False LOC122360600
XM_043261363.1 mRNA upstream 524949 11335966 ~ 11386993 (-) False LOC122360600
TU164366 other downstream 60037 10746793 ~ 10748300 (-) False LOC122361037
TU163906 other downstream 1535732 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 1656154 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 2160782 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 2172115 8633350 ~ 8636222 (-) True wu:fj39g12
TU164396 other upstream 50934 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 50934 10861951 ~ 10866428 (-) False LOC122360812
TU164545 other upstream 459647 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 599661 11410678 ~ 11411777 (-) True G111490
TU165859 other upstream 2843043 13654060 ~ 13683909 (-) True zgc:92606

Expression Profile