RNA id: XM_043261974.1


Basic Information

Item Value
RNA id XM_043261974.1
length 2386
RNA type mRNA
GC content 0.40
exon number 3
gene id nat14
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13552540 ~ 13555963 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCTACGCAGTTTGCGCAGTTTCGTATTCCCGGTTGAGGATTGGTTGAAACTGGATTCCATGCGGGAAACAACGCTGAATCCTTAGGTCCCTCAAATACTGCAAGCAAGTTACATCGGTTACAGAGGGGGACATTTTTGCATTACCTTGCTCTTAAAGCACTCGCGGCTTTTTTAATATTGGGTAAAATGGTTAGATTGGACCTTGGTGATGTACTTCTGCGCAGGATGCAGGAGAAGGACATTGAAGCTGTAAAGGCTCTCATCAAGGAGGGATGTGAGGGAACGGAGAACCGCCTGATTCTTTACCTTCTGACTCGTCCTCTCGCTCTCCTCATGCTTGCCATCCTCTCCTCCATCCTCCGCTGTGTACTGCACTCTTTTATCTTGGCCTTGGTCAGTCCcgtcttcatcttcatcatctacCTCAAACTCACCATACCACGGTCGGTGGGCATCTTGGGCTCCAGCAGGCCATACTGGGACTACATGGGCAGCAGTTACCAAGCGGACACCGAGCCAGATCTACCCAATCCTCACTCTGGCAGAGCCAGACTGGAGAAAACCAGACGGCGTAAAAAACCCAAAGAAAAGGACAAGACGCACGAGAGAGAACAGGTGGATGAGGATGAGCTGAAGGAGAGAGCGAAGGTTGCTGGCGAGGTGTGGGTGGCGGACTCTGATGGGGAGGTTATGGGATGCGTGGCCAGAGATGGTTGGAGTCGGGACGGTGTATGTAGGATCTGCAGGCTGGTGGTCCAGAGCTGGTACCGCAGAGAGGGACTGGGCAGACTGCTGGTGCAGGGACTGGAGTCCAGAACAAAGCAGGGTGGCATACAGCGGGTCTATGCCCATGTGCCCATTCCATCCAAAGTGGGAGAAGCTTTCTTCAGGAGGCTGGGTTATCGTCTGCAGGGCGAGACTGAAGGGACTactggagaggaggaggaggaggatgattATGAAGAGCCAGAGAAGGGTTGGTTGGGTTTCCCTTTAACTAAAGTCTTTGTTAAGGATCTGTAAATCTCACTGAAACGGGAACGAGCAAAGCAACGCGTAATTTAAGGAGTTACACATTATGGTCAATAAACTTGCAGTGTAATGTAAccacaaaaataactttttacatttaaacaaaaaaaacaaataagtcaAATTGAAGCTAATGGTGAGGCAGCCAGTAGGACAAAAATAGGGGCCGGTGTTTGgatttaagtaaaatatgtaaagcaaataattttgttaaaaattaaaaattgttataaaactgttaaaaattgTGAATGAGTTATGAAACTGTTTAAATACTCATTTTACAGGCATTAATAGTTTATGGAATAGGCCtgggcaatatatatataaaatgcacaatatcACATTCAGTATCATAAATATTCACCTgcatagcttgtcagtgatctccAATCTCCgactctgtgtattaactgcctctttatttgaaaacaggtgatggagatttgcTACTAATCAAAGAACCAACTTAACTGACGAGATGCGCATGAAAATATTCTGCAATATATTGTCCAGCCCTATTATTGAGTGATATTGCCATGAATTTGTGAAATTAAGCATACCTAGTATACAGTGGTGGGAATAATAATTTGTACtgcttataattattattacaaataatttagtACAAGCCACCGCTGAtacttattaaataatttcatcaAACTTAAAATCATGTTAACAGGCATATTGTATACGTCTTGTGGCATTACTATTGAAACGGTGAGTGTTTTGCCATTGGCTCCACTGTAAGTTAcctatttgtgctttttaatgaaatgaattgtAGGtacagatatttttatgaattgtgGTGCATATCCAAGTGTAACTtatcaaaaactaaaatcaaaatgttctttttgaatAGGATTAGTTCACAATTATATCCATAACATTTAGTGGATCATGTAATGCCGACTTGAACCTTGAATATTCCCTCTATGCTTAGTTTCAGATTTATAAATGGATTTGTTAATTTTCACATCATCCCAGTGAATCACTAACATCAGGAACCTCTCTCAGAATAGATCAAAATCATCTAAAATCAATTCCGCTGTTGATTATAAgagctttttaatgtttgtgaACGTTACAGAAATCATCCCTGTGTTGCAAAGCCTGAGCCTGAAAGGACAATCAGTCAtatgatttattgtttataGAATGGATTGATCTTTTGTTTTTGGACAAAGATAGTGATTTACGTTTGTTTACCTTATTTATTCACCTTATTTATTATGTTGTATTTATGAGTGAATTTGAGGGTTTCTGTGCAAACATTTTGTACGTTTCATTAGACTGCTAatgaatatgctttttttaatgtacaaataaaagttttgtctCTCAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008080 N-acetyltransferase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU165828 lncRNA downstream 9229 13534721 ~ 13543311 (-) True G112350
TU165793 lncRNA downstream 80854 13449507 ~ 13471686 (-) True G112327
TU165807 lncRNA downstream 90815 13455557 ~ 13461725 (-) True G112339
TU165802 lncRNA downstream 105362 13440670 ~ 13447178 (-) True G112336
TU165763 lncRNA downstream 118245 13431144 ~ 13434295 (-) True G112315
TU165843 lncRNA upstream 50668 13606631 ~ 13609334 (-) True G112361
TU165864 lncRNA upstream 62724 13618687 ~ 13619336 (-) True G112377
TU165875 lncRNA upstream 92664 13648627 ~ 13736231 (-) True G112385
TU165880 lncRNA upstream 103042 13659005 ~ 13659470 (-) True G112390
TU165849 lncRNA upstream 132543 13688506 ~ 13689091 (-) False G112363
XM_043261975.1 mRNA downstream 4228 13546280 ~ 13548312 (-) True aicda
XM_043261305.1 mRNA downstream 36038 13506631 ~ 13516502 (-) False epn1a
XM_043261306.1 mRNA downstream 36039 13506631 ~ 13516501 (-) False epn1a
XM_043261304.1 mRNA downstream 36039 13506631 ~ 13516501 (-) True epn1a
XM_043260536.1 mRNA downstream 58309 13487351 ~ 13494231 (-) False u2af2a
XM_043261487.1 mRNA upstream 287 13556250 ~ 13564227 (-) True znf628
XM_043261488.1 mRNA upstream 287 13556250 ~ 13563899 (-) False znf628
XM_043261927.1 mRNA upstream 9439 13565402 ~ 13573595 (-) True il11a
XM_043261420.1 mRNA upstream 36069 13592032 ~ 13604741 (-) True rasip1
XM_043260976.1 mRNA upstream 117793 13673756 ~ 13678258 (-) False si:dkey-26c10.5
TU164609 other downstream 2140763 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 2266108 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 2669329 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 2686112 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 2804240 10746793 ~ 10748300 (-) False LOC122361037
TU165859 other upstream 98097 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 678591 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 1353362 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 1912517 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 1912517 15468480 ~ 15496375 (-) False rps19

Expression Profile