RNA id: XR_006252847.1



Basic Information


Item Value
RNA id XR_006252847.1
length 154
lncRNA type inter_gene
GC content 0.42
exon number 3
gene id LOC122361039
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10924115 ~ 10924764 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CACAGGCTACAGATCACAGATCTACTGATTAAACCAGTGCAGCGGATCATGAAATACCAGCTTCTTCTGAAGGATTTTCTCAAGTTCTCCAAAAGGCTGGATTGGACACTATAGAATTAGAGAAAGCTGTAGAGGTGATGTGTGTTGTTCCAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU164374 lncRNA downstream 130499 10791564 ~ 10793616 (-) True G111329
TU164327 lncRNA downstream 193700 10730168 ~ 10730415 (-) True G111298
TU164074 lncRNA downstream 1021134 9889071 ~ 9902981 (-) False gask1a
TU164073 lncRNA downstream 1035886 9879635 ~ 9888229 (-) False gask1a
TU164072 lncRNA downstream 1048451 9875392 ~ 9875664 (-) True G111097
TU164468 lncRNA upstream 235075 11159839 ~ 11160056 (-) True G111393
TU164502 lncRNA upstream 300422 11225186 ~ 11225409 (-) True G111420
TU164503 lncRNA upstream 301018 11225782 ~ 11226073 (-) True G111421
TU164527 lncRNA upstream 335981 11260745 ~ 11261048 (-) True G111437
XR_006252822.1 lncRNA upstream 336863 11261627 ~ 11264238 (-) True LOC122360619
XM_043261674.1 mRNA downstream 40691 10857520 ~ 10883424 (-) True LOC122360812
XM_043261964.1 mRNA downstream 100926 10817891 ~ 10823189 (-) False LOC122361032
XM_043261963.1 mRNA downstream 103437 10817891 ~ 10820678 (-) True LOC122361032
XM_043261961.1 mRNA downstream 113098 10808337 ~ 10811017 (-) False LOC122361028
XM_043261960.1 mRNA downstream 113137 10808337 ~ 10810978 (-) True LOC122361028
XM_043261367.1 mRNA upstream 408411 11333175 ~ 11386993 (-) False LOC122360600
XM_043261363.1 mRNA upstream 411202 11335966 ~ 11386993 (-) False LOC122360600
XM_043261362.1 mRNA upstream 411202 11335966 ~ 11386993 (-) False LOC122360600
XM_043261361.1 mRNA upstream 411202 11335966 ~ 11386993 (-) True LOC122360600
XM_043261369.1 mRNA upstream 411592 11336356 ~ 11386993 (-) False LOC122360600
TU164396 other downstream 40904 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 57687 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 175815 10746793 ~ 10748300 (-) False LOC122361037
TU163906 other downstream 1651510 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 1771932 9145930 ~ 9152183 (-) True G110911
TU164545 other upstream 345900 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 485914 11410678 ~ 11411777 (-) True G111490
TU165859 other upstream 2729296 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 3309790 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 3984561 14909325 ~ 14913646 (-) False LOC122359907