RNA id: TU178735



Basic Information


Item Value
RNA id TU178735
length 236
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G120989
representative True

Chromosome Information


Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 14088640 ~ 14088875 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCGGACTCTTCAGGTCAGAAACCCATGTAATAAATGGGTTTGCGGATCAGCGTTTCAGAGATGTTTGAGCACGCTGGAGAGCGATCATTTAAGCTCTTTCGCATTGTCTTTGGAGAATGGATcctaaaaaggaaaagattgaGGAGGAGAATGGTGTTTTGGAAGAGCCTGGTAAGGTAAATGAAAGGGAATCGTGCAACGACGATCAATCAGTGTCGAAGGAGGAAGACCTTTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU178715 lncRNA downstream 102421 13981547 ~ 13986219 (-) False kidins220a
TU178729 lncRNA downstream 112414 13975747 ~ 13976226 (-) True G120983
TU178728 lncRNA downstream 124770 13963593 ~ 13963870 (-) True G120982
TU178726 lncRNA downstream 154955 13933420 ~ 13933685 (-) True G120980
TU178655 lncRNA downstream 273626 13777725 ~ 13815014 (-) True G120929
TU178834 lncRNA upstream 302509 14391384 ~ 14392042 (-) True G121051
TU178856 lncRNA upstream 362748 14451623 ~ 14456789 (-) True G121069
XR_006252970.1 lncRNA upstream 373250 14462125 ~ 14580868 (-) True LOC122361512
TU178876 lncRNA upstream 630684 14719559 ~ 14724754 (-) False LOC122361652
TU178903 lncRNA upstream 688011 14776886 ~ 14777109 (-) True G121096
XM_043262938.1 mRNA downstream 4699 14040353 ~ 14083941 (-) False mboat2a
XM_043262940.1 mRNA downstream 4700 14040353 ~ 14083940 (-) False mboat2a
XM_043262939.1 mRNA downstream 4700 14040353 ~ 14083940 (-) True mboat2a
XM_043262906.1 mRNA downstream 48429 13985714 ~ 14040211 (-) False kidins220a
XM_043262909.1 mRNA downstream 48429 13985714 ~ 14040211 (-) False kidins220a
XM_043262967.1 mRNA upstream 54069 14142944 ~ 14147213 (-) True itgb1bp1
XM_043262933.1 mRNA upstream 71644 14160519 ~ 14171694 (-) True adam17a
XM_043262934.1 mRNA upstream 71644 14160519 ~ 14171692 (-) False adam17a
XM_043262951.1 mRNA upstream 84396 14173271 ~ 14204581 (-) False rnf144aa
XM_043262953.1 mRNA upstream 84396 14173271 ~ 14204536 (-) False rnf144aa
TU178546 other downstream 888613 13196907 ~ 13200027 (-) False LOC122361883
TU178308 other downstream 1267972 12817192 ~ 12820668 (-) True G120660
XR_006253087.1 other downstream 2147627 11918290 ~ 11941013 (-) False evla
TU177874 other downstream 2283927 11800703 ~ 11804713 (-) False alkal2b
TU177672 other downstream 2770399 11303115 ~ 11318241 (-) False ush2a
XR_006253090.1 other upstream 724045 14812920 ~ 14839813 (-) False myo6b
XR_006253025.1 other upstream 921951 15010826 ~ 15026415 (-) False ptgr2
TU179062 other upstream 994943 15083818 ~ 15099924 (-) True crip2
TU179418 other upstream 1596664 15685539 ~ 15686948 (-) False LOC122361708
TU179430 other upstream 1600016 15688891 ~ 15689794 (-) True G121438

Expression Profile