RNA id: TU178876



Basic Information


Item Value
RNA id TU178876
length 429
lncRNA type sense_over
GC content 0.40
exon number 4
gene id LOC122361652
representative False

Chromosome Information


Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 14709491 ~ 14733577 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTCTTTGCTACGGCGGAAAAAAGTGTCTTCAGAGCCACCAACAAAAGGAAGGAGGCAGTAGTAGCATCTGAAGTACTAGAAGATGAAAATATGAAGGTGGATCTTCCTATTGAACAGATGCAAGTAAAAGAAGTTGAGGAGGAACAAAACTTCTACAATGACCTCAGACCAGGAAGTAATAGCCCTGCTAAAAACTACCATCATGCATCTTTTTCAACAAAGTCATCTACGTCCGGAACACATATgATTTCAGAATATACCTCAATTACGAAGGAGTCAAGAGACCTCCAACCCAACAGCTATGAAGAGAGCAGGGACCAGTCATTAGATCAACAACAGCCAAAAGTATGAAGCTCATGGAAAAATGCAACTAAACATATGAAATCAAATATCTCTGATTTTGCACTCTTTGTGATGCTGAAACTTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252970.1 lncRNA downstream 138691 14462125 ~ 14580868 (-) True LOC122361512
TU178856 lncRNA downstream 262770 14451623 ~ 14456789 (-) True G121069
TU178834 lncRNA downstream 327517 14391384 ~ 14392042 (-) True G121051
TU178735 lncRNA downstream 630684 14088640 ~ 14088875 (-) True G120989
TU178715 lncRNA downstream 733340 13981547 ~ 13986219 (-) False kidins220a
TU178903 lncRNA upstream 52132 14776886 ~ 14777109 (-) True G121096
TU178951 lncRNA upstream 66175 14790929 ~ 14792068 (-) True G121123
TU179090 lncRNA upstream 314969 15039723 ~ 15045366 (-) True G121214
TU179061 lncRNA upstream 335239 15059993 ~ 15064671 (-) True crip1
XR_006252989.1 lncRNA upstream 476942 15201696 ~ 15210544 (-) True LOC122361632
XM_043262299.1 mRNA downstream 207896 14509772 ~ 14511663 (-) True sox11a
XM_043262974.1 mRNA downstream 312883 14399105 ~ 14406676 (-) True LOC122361878
XM_043263234.1 mRNA downstream 321774 14392403 ~ 14397785 (-) True LOC122361997
XM_043262946.1 mRNA downstream 509682 14206780 ~ 14209877 (-) True rsad2
XM_043262954.1 mRNA downstream 515136 14173271 ~ 14204423 (-) False rnf144aa
XM_043263805.1 mRNA upstream 10407 14735161 ~ 14740548 (-) True colec11
XM_043263806.1 mRNA upstream 10407 14735161 ~ 14740541 (-) False colec11
XM_043263804.1 mRNA upstream 10407 14735161 ~ 14740173 (-) False colec11
XM_043263712.1 mRNA upstream 67432 14792186 ~ 14839813 (-) False myo6b
XM_043263711.1 mRNA upstream 67432 14792186 ~ 14839813 (-) True myo6b
TU178546 other downstream 1519532 13196907 ~ 13200027 (-) False LOC122361883
TU178308 other downstream 1898891 12817192 ~ 12820668 (-) True G120660
XR_006253087.1 other downstream 2778546 11918290 ~ 11941013 (-) False evla
TU177874 other downstream 2914846 11800703 ~ 11804713 (-) False alkal2b
TU177672 other downstream 3401318 11303115 ~ 11318241 (-) False ush2a
XR_006253090.1 other upstream 88166 14812920 ~ 14839813 (-) False myo6b
XR_006253025.1 other upstream 286072 15010826 ~ 15026415 (-) False ptgr2
TU179062 other upstream 359064 15083818 ~ 15099924 (-) True crip2
TU179418 other upstream 960785 15685539 ~ 15686948 (-) False LOC122361708
TU179430 other upstream 964137 15688891 ~ 15689794 (-) True G121438

Expression Profile