RNA id: TU179720


Basic Information

Item Value
RNA id TU179720
length 1323
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G121639
representative True

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 16482647 ~ 16483969 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGGTAAAGGAGTTGGAGGCTGGTAGATCGGTTACAAAATCTATGGCAATGTGAGACCATGGTCTTTCTGGTATGGGTAGTGGTTGAaggagtcctgctgggcgttgaTGGGAGGTCTTTGTGATGTTGCACGTCTCACACTGTTGAACGAAGTGGATGGTGTCTGAGCGAATGGTTGGCCACCAGAAACGATTGTTGACTAATTGGAGGGTGGCTGTGATACCTGGATGACCGGCGCTGGGGGTATCATGAACCCAATGCAGAACTCTTTGCCGTAATGTTTGAGGCACGTACGTTCGATTGGGAGGGCATGTTGGTGGGACTGGTTCGGAAAGTTGGGCCTCTGTGATCTCGGTCATGATATCCCACTGGACTGGAGCAACAATGCGGGCTGACGGTAGGATGGGTTCGTGAGAGAATTCCTGAGGGATGCTCTCAAACTGCCTGGATAAGGCATCCGCTTTAGTGTTCTTTGACCCTGGGCGAtaagtgactttaaaatcaaatctgGAGAAAAACAGCGACCATCTGGCTTGTCGTGAATTCAGACGTTTGGCAGACTGAATGTACTCCAGGTTTCTGTGATCGGTCAAAATGGTGAACGGTACTTTAGCCCCCTCCAGCCAATGCCGCCACTCCTCGAGAGCTGACTTCATTGCAAGAAGTTCTCTGTCCCCCACATCATAGTTACGCTCAGCAGAGTTAAGCTTACGGGAGAAGTAGGCACATGGAAAGAGTTTTGCTGGCTGTCCGTGGCGTTGCGATAATATTGCTCCAATACCAACGTTAGAAGCATCGACTTCCACAATAAACTCTCGATCAGGGTCTGGGTGATGGAGTATCGGGGCAGACGTGAATTTTCTCTTGAGTGAGTCAAATGCCTGGATGCTGTCAGGTGACCAAGAAAGACGATGAGAATTCTTTTTGACTAGCGTGGTGAGAGGTGCGGCTACAGTACTGAAATTACGGATGAATCTCCGATAAAAATTAGAGAAGCCCAGAAATCGTTGCAATTCCTTGACTGTGGAGGGGCGCGGCCACTCTACGACTGCCTTGACCTTGTGCTCGTCCATCGTTACCCCCTCAGAACTGATGATATAGCCCAGGTAGGCCACTTGAGTCttatgaaactcacatttctggAGCTTGGCGTACAATTGATTCTCTATCAAGCGCTGGAGGACTGTCCTTACGTGAGAGACATGAGCATCAAGGCTGTCGGAATAGACGAGAATGTCATCCATGTAGACGATTATAAATTGGTTTAGCATGTCTCTAAACACCTCATTCACGAAGGCCTGGAAGACAGATGGACTGTTCGCGA

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko04110 Cell cycle
ko04111 Cell cycle - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU179528 lncRNA downstream 148208 16334043 ~ 16334439 (-) True G121509
TU179526 lncRNA downstream 196244 16286122 ~ 16286403 (-) True G121507
TU179466 lncRNA downstream 578996 15829484 ~ 15903651 (-) False LOC122362005
TU179467 lncRNA downstream 578996 15836290 ~ 15903651 (-) False LOC122362005
TU179457 lncRNA downstream 720162 15760532 ~ 15762485 (-) False LOC122362003
TU179726 lncRNA upstream 65286 16549255 ~ 16550184 (-) True G121644
TU179680 lncRNA upstream 333637 16817606 ~ 16893398 (-) True G121609
TU179814 lncRNA upstream 648549 17132518 ~ 17132726 (-) True G121715
TU179810 lncRNA upstream 652901 17136870 ~ 17149028 (-) True G121711
TU179816 lncRNA upstream 666543 17150512 ~ 17157229 (-) True G121717
XM_043263475.1 mRNA downstream 13168 16466633 ~ 16469479 (-) True prph2la
XM_043262547.1 mRNA downstream 42301 16438230 ~ 16440346 (-) True gpr132a
XM_043263248.1 mRNA downstream 275033 16118122 ~ 16207614 (-) True LOC122362009
XM_043263313.1 mRNA downstream 481936 15952582 ~ 16000711 (-) True LOC122362058
XM_043263241.1 mRNA downstream 531209 15901701 ~ 15951438 (-) True LOC122362005
XM_043263167.1 mRNA upstream 8703 16492672 ~ 16513358 (-) False c17h14orf180
XM_043263166.1 mRNA upstream 8703 16492672 ~ 16513358 (-) True c17h14orf180
XM_043263168.1 mRNA upstream 11203 16495172 ~ 16513359 (-) False c17h14orf180
XM_043262144.1 mRNA upstream 378428 16862397 ~ 16870032 (-) True LOC122361412
XM_043263554.1 mRNA upstream 417914 16901883 ~ 16912407 (-) False ttc8
TU179448 other downstream 742161 15738262 ~ 15740486 (-) True G121456
TU179430 other downstream 792853 15688891 ~ 15689794 (-) True G121438
TU179418 other downstream 795699 15685539 ~ 15686948 (-) False LOC122361708
TU179062 other downstream 1382723 15083818 ~ 15099924 (-) True crip2
XR_006253025.1 other downstream 1456232 15010826 ~ 15026415 (-) False ptgr2
TU180175 other upstream 1478320 17962289 ~ 17963965 (-) False acyp1
TU180176 other upstream 1478320 17962289 ~ 17963965 (-) False acyp1
TU180335 other upstream 1795496 18279465 ~ 18281572 (-) False LOC122361613
TU180588 other upstream 2147288 18631257 ~ 18644980 (-) False LOC122361943
TU180607 other upstream 2302913 18786882 ~ 18790880 (-) True G122247

Expression Profile