RNA id: XM_043262314.1



Basic Information


Item Value
RNA id XM_043262314.1
length 1216
RNA type mRNA
GC content 0.57
exon number 12
gene id cdin1
representative False

Chromosome Information


Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 17216049 ~ 17276543 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCGTTTGAACCAATTCGCGGGAGTTGATCAGGAAGTGACGCTGTAGCGTGGCGCGAGCGGCGGAGGCTGCGGTGTTTACAGCGTTGTTGGgattttaaagtcttttatCGGGGCGTGTTTGTGATGGATTCTGTGTCCGCTGTCGCagACGAGGCGGTGAGCGGGAAGCAGATCTGCAGAGCGGAGTACCGGGCCATCGGCCGCTTCGTGGAGCAGCTGCGACCCACGAGACAGTGCATGCAGACGCTACGGACTCAGTTCCCACATCTTCCTGCGTCCACTCTTCTGAGCATCTTCTCCCAGGAGTACCAGaaGAGGATGAAGCGCAGCATGGCCAGGCATCACGCTCCTGACGTGCTCAGAGCATACTATCAGAGGTACCGCGGCGAAGCCGAGACTCGTCCTCAAGCGCCGCTTCTGCTGGAGCTCGCCAACCAGgtggaCCTGTCTCCGGCTCTGCTGGCCCGTCTGATGGTGGAGTGTTTTCTGGAGGAGAGCGAGGCTTCAGTCCCAGCTTCCAGACACATCCTCAACAACATGCTGCGCGAGCCGTATTTAATTCCTGACCTGCTGCTAGCGAAGCACGTCGAGCAGTGCACAGTAAATGACTGCTGTTATGGACCGCTGGTCGACTGCATCAAACATGCCATCGGTCTGGAGCACGAGGACCTGCTGAGAGACAAACTCAGAGAGAGGAGCCTGTCGTTCTTAGATGAGAACCAGCTCCGAGCCAAAGGCTACGACAAAACCCCTGACATCATTCTGGAGGTGCCCATCGCTGTTGATGGTCATATAGTCCACTGGATTGAGAGCAAAGCTTCATTTGGAGATGACCACAGCCATCACACCTACCTAAACGAGCAGTTCTGGAGCTACTGCAACAGGTTCGGCCCGGGGCTGGTCATCTACTGGTACGGGTTTGTGTCCGAGCTGGACTGCCAGCGGGAGCGAGGGATCCTGCTGAGAGACGGCTTCCCCTCGGACGTCGTGACCCTGTGTCAGGGGCCGGCACGGGGCCCGCTCTGACCCGGCACGGGGCCGCTCGTCGCTGTGGATGTGAATCCGGAAGCAATTTAGCTTTCCTGCAGCGTGAGACTCCTGGCAAACATCTGCGGTGAACTCCGGCTGAACCCGTCCTGCTGAGAGGCAGGTGACACGCTgctttcattgtttgttcagttATGAAGTGCAATAAAGTTATAAGTTCTTCATGTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU179834 lncRNA downstream 771 17215055 ~ 17215278 (-) True G121734
TU179821 lncRNA downstream 5789 17168223 ~ 17210260 (-) True G121721
TU179816 lncRNA downstream 58820 17150512 ~ 17157229 (-) True G121717
TU179810 lncRNA downstream 67021 17136870 ~ 17149028 (-) True G121711
TU179814 lncRNA downstream 83323 17132518 ~ 17132726 (-) True G121715
TU179930 lncRNA upstream 76869 17353412 ~ 17602299 (-) True G121799
TU180032 lncRNA upstream 306360 17582903 ~ 17583589 (-) True G121852
TU180034 lncRNA upstream 343677 17620220 ~ 17620671 (-) True G121854
TU180107 lncRNA upstream 514399 17790942 ~ 17810401 (-) True G121905
TU180177 lncRNA upstream 685746 17962289 ~ 17963965 (-) False acyp1
XM_043262791.1 mRNA downstream 161751 17036069 ~ 17054298 (-) True spred1
XM_043262790.1 mRNA downstream 161756 17036069 ~ 17054293 (-) False spred1
XM_043262311.1 mRNA downstream 181647 17029621 ~ 17034402 (-) False fam98b
XM_043262310.1 mRNA downstream 181647 17029621 ~ 17034402 (-) True fam98b
XM_043262644.1 mRNA downstream 201569 17005300 ~ 17014480 (-) False atxn3
XM_043262328.1 mRNA upstream 189327 17465870 ~ 17505049 (-) True angel1
XM_043262329.1 mRNA upstream 190215 17466758 ~ 17505049 (-) False angel1
XM_043263743.1 mRNA upstream 246431 17522974 ~ 17528811 (-) True LOC122362317
XM_043263051.1 mRNA upstream 267287 17543830 ~ 17559163 (-) True dlst
XM_043263338.1 mRNA upstream 361047 17637590 ~ 17690815 (-) False esrrb
TU179448 other downstream 1475563 15738262 ~ 15740486 (-) True G121456
TU179430 other downstream 1526255 15688891 ~ 15689794 (-) True G121438
TU179418 other downstream 1529101 15685539 ~ 15686948 (-) False LOC122361708
TU179062 other downstream 2116125 15083818 ~ 15099924 (-) True crip2
XR_006253025.1 other downstream 2189634 15010826 ~ 15026415 (-) False ptgr2
TU180175 other upstream 685746 17962289 ~ 17963965 (-) False acyp1
TU180176 other upstream 685746 17962289 ~ 17963965 (-) False acyp1
TU180335 other upstream 1002922 18279465 ~ 18281572 (-) False LOC122361613
TU180588 other upstream 1354714 18631257 ~ 18644980 (-) False LOC122361943
TU180607 other upstream 1510339 18786882 ~ 18790880 (-) True G122247

Expression Profile