RNA id: XM_043262328.1


Basic Information

Item Value
RNA id XM_043262328.1
length 3095
RNA type mRNA
GC content 0.47
exon number 10
gene id angel1
representative True

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 17465870 ~ 17505049 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGTCACGCCGGGAACGCCCCCTCGCGTCCGGTGCAGGTGATTAAGTCGGCGTGCGGTCCGCCGGTGGTCATGATCGCGACTGTGATGTTTTACGCGCTGTATCCTCTCTCGAGGCTCATCGGCAGAGTTTCAGAACTGTGGTGCAAGGCTCCGTTTGTGTACATTAATGGCAAAGAGGTTTGGGATGGTGGCGGTGCTCTTTCTGGACAGCAGCAGACGAGCCTGTTACTGCGGTGGAACAGCACAGAAAACACCAACACTGCTCCTGATCCAGACCACATGGACGCTGAGAGTCCTCACGGAGCTGTGGTAGATCTGCTGGATGTCTGTGAGGTGAAAAAGACACAAGAAGAGTTGAACCAGGAGGAAATGCATGAAGACGTGCACAAATCAGTGCGTTCCTTCAGTCAGATGGAAGCTCCTTCAGTCTCTGTGTGTGATGGAAGTGTTGCTTTGAGAGCGTGTGATTGGTCAGAGAGTGACGTACACCTCTCAGAATCAGCGCTCCGGGGTTTAGAAGATCCTGTGATAAAAGAGTCTGCGTTTCCCAATACTGAATATCAGAGTCTCTCAGACATTGATAACGTGCTCTCTGAATTCAAGCAGCTCGGGGCTCATGATGAAATGGCCGACCGTGATGACCGTGAGGTGGATTCGTTCATGTCAGATAGACTCGCTTCACTCGCTCCCAGCACCGACCTCTTCCTGGGGTTTGATTCTGAGGCTGGAAATGAAGCCCTTGGCAGCCCGGTGTTTGATTTGGCGGCTTTGCTCGCAGACTCTCAGCAGGTTAAGGCACCGGCGGAGCCTGTCGGCTGGCACTTTCCCGTCGGCCTTGGCCTGTCACAGATGTGTTACTGCCCTTATGTGCACTTTCCTGACGTCAGCTACTATCCTGCGCTTCAGGACAATGACAACATTGAAGTGATGTGGCGGGTGTGGGAGGATCTTGAAACCCAGACCAGTTCCTGTGAGGACACAGCTGCTGTGTTTGACTTCAGCATCATGTCTTACAACATTTTGGCTCAGGATCTGCTAGAAGTGAACCCACAGCTGTACACACACTGTCCAGAGGAAGTGTTAGTGTGGGACCAGCGACTCCGGACCATTCTGAAGGAGCTCCAGATTTGGCAACCTGATATTATTTGTCTTCAGGAAGTTCAAGAAGATCATTTCCTAGAGCAGATCTATCCTGTCCTGACTGACATGGGTTACACCTGCATCTACAAACGCCGCACTGGCACCAAAACGGATGGCTGTGCGGTGTGTTATCACAGTGAGCGCTTTACCCAGCTTTCCGTCAATCTGCTGGAGTTTCGACATTCAGACTGTGAGCTACTGGATCGTGACAACGTGGCCGTTGTGGTGCTCCTCCAGCCGATGGCCGGGCAGAATATAGCTTTCAGCCCCATATGTGTGGCCAACACACACCTGCTGTTCAACCCCAGGAGAGGAGATGTGAAGCTCGCCCAGCTGGCCATCGTGTTTGCGGAAATTGACATCATGATCAAAAAATGCAGGAGTGAAGGAGGACACTGTGAGGTGGTTTTATGTGGAGACTTTAACGCTTTACCCAGCAGCCCTCTGTGGAATTTCATCACCACCGGACAGCTTTACTACCAAGGCTTACCTGCTTGGATGGTCTCAGGTCAGGTGGATTTGTCCTATAAAGTCCATCACTCCAGGCTTTTCTCTCCGCTGTGGCCCAGAAGCCTCGGCATCACTGACGGCTGTCAGTACAGGTCTTCCACACAGACCACAGCTTCAGACCCTCGTCAATACAGCACTGAGTTTCTGTGTCAGCTGCGATACTGTCCGGCGGCGTGCGTGCGCCCCGCTGATCTGGAGCTCATACCAGGAGTCACCGACAAAACACCAGACCCTGAAGACATGGAGATGTTTAGTTCAAGGTTTGGACACACACTGCGTCACACACTGAACCTGAGGTCAGCTTACAGTCCTGTCCAGATGGACACACAGACTGCTGTGGTCAGCTCTCTGAACTCAGAGGGAGGAGCGATGGTCGACTACATCTTCTACTCCACCTGCAGGACCGGCTCCGCTGCAGCTGAAGAGAGCGCTGGAGGATTGAAGCTGCTGGCTCGTTTGTCTCTGCTGTCCGAGGCTGATCTCTGGTCTCTGCGAGGACTTCCTAACGAAACGTTTCCCTCGGATCATCTCAGTCTGATCGCCAAGCTTCGGCTACAGTCTGACTCTAAAATTTGACAAATGTAAGAATCGCTTGTCTTCATCATTTTCAGTgccttatatatttatatgatttagtTTAGTGATGGTTCGTGTGAAATATTCTCCAGCGTGGAGTCTGATGTGAGGAAACATGATGCTCCGGTTAAGGTTGACATGTTCAAGATAATGTGACTAGAAAGCAGTTACACGCATCTGTTAGttttcagtttctttcattttgagtttgaaaaaaaaaatatatatatatatatatttatatatatttattttgaacaaagctaaataaataactacatgCACTGCTGTTGTCTTTGCTGGTTGAACACACAAGCAAATGATGACAGGCAGCGTCTCCACAGCCACACGATGCTGTTATCGAAGGTCAGAATGATGGGATTTAGCgcatttgaagtgaaagtacTTGATAAACATATCCACTCAGTATCAGCTCATATTTGACCAAGATGGCTTTTGGAGGCCTTTGCATCTGAAATACATCAAAAACTTTTTCTTCAAGCTCAATGAAAAGAGGTTTGCAGAAAGTAATTCACCGCTAAAACCATGTTCATCCTCCCTGAACAAAAAGCTTGACTGGAAAATGCCCCCAAAAGATATTAAAATTCAAGTCAAATTAACTACAGGTAAAACTTTGCAGtaaaattaacatgaaaaaaaatgtatcattatttcttcatcttcaagttatatttaataaacccGAACTGAACTACTGCATTATAGTTAATAAAggttaataaatactttaacaTGAGCTATATATTTAAGCATTAACAAATAGAACGTTATTGTAATGTGGCAATTGTTTTCTAATACttgtgtgtgagatgtgatacatttataaataaactataacaTTAATCTA

Function

GO: NA

KEGG:

id description
K18729 ANGEL; protein angel

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU179834 lncRNA downstream 250592 17215055 ~ 17215278 (-) True G121734
TU179821 lncRNA downstream 255610 17168223 ~ 17210260 (-) True G121721
TU179816 lncRNA downstream 308641 17150512 ~ 17157229 (-) True G121717
TU179810 lncRNA downstream 316842 17136870 ~ 17149028 (-) True G121711
TU179814 lncRNA downstream 333144 17132518 ~ 17132726 (-) True G121715
TU180032 lncRNA upstream 77854 17582903 ~ 17583589 (-) True G121852
TU180034 lncRNA upstream 115171 17620220 ~ 17620671 (-) True G121854
TU180107 lncRNA upstream 285893 17790942 ~ 17810401 (-) True G121905
TU180177 lncRNA upstream 457240 17962289 ~ 17963965 (-) False acyp1
TU180178 lncRNA upstream 457240 17962289 ~ 17963965 (-) True acyp1
XM_043262315.1 mRNA downstream 189327 17216049 ~ 17276543 (-) False cdin1
XM_043262314.1 mRNA downstream 189327 17216049 ~ 17276543 (-) False cdin1
XM_043262316.1 mRNA downstream 189330 17216049 ~ 17276540 (-) True cdin1
XM_043262791.1 mRNA downstream 411572 17036069 ~ 17054298 (-) True spred1
XM_043262790.1 mRNA downstream 411577 17036069 ~ 17054293 (-) False spred1
XM_043263743.1 mRNA upstream 17925 17522974 ~ 17528811 (-) True LOC122362317
XM_043263051.1 mRNA upstream 38781 17543830 ~ 17559163 (-) True dlst
XM_043263338.1 mRNA upstream 132541 17637590 ~ 17690815 (-) False esrrb
XM_043263334.1 mRNA upstream 132541 17637590 ~ 17688102 (-) False esrrb
XM_043263333.1 mRNA upstream 132541 17637590 ~ 17688102 (-) False esrrb
TU179448 other downstream 1725384 15738262 ~ 15740486 (-) True G121456
TU179430 other downstream 1776076 15688891 ~ 15689794 (-) True G121438
TU179418 other downstream 1778922 15685539 ~ 15686948 (-) False LOC122361708
TU179062 other downstream 2365946 15083818 ~ 15099924 (-) True crip2
XR_006253025.1 other downstream 2439455 15010826 ~ 15026415 (-) False ptgr2
TU180175 other upstream 457240 17962289 ~ 17963965 (-) False acyp1
TU180176 other upstream 457240 17962289 ~ 17963965 (-) False acyp1
TU180335 other upstream 774416 18279465 ~ 18281572 (-) False LOC122361613
TU180588 other upstream 1126208 18631257 ~ 18644980 (-) False LOC122361943
TU180607 other upstream 1281833 18786882 ~ 18790880 (-) True G122247

Expression Profile