RNA id: XM_043262644.1


Basic Information

Item Value
RNA id XM_043262644.1
length 1667
RNA type mRNA
GC content 0.53
exon number 11
gene id atxn3
representative False

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 17005300 ~ 17014480 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTTTCCGGCCGTTCCGTCATTCACACTTTCAAACATGGAGTCTATATTCCACGAAAAAcaagagggctctCTGTGTGCGCAGCACTGCTTGAACAACCTCCTGCAGGGAGAGTACTTCAGTCCGGTGGAGCTGTCGTCCATCGCTCAGCAGCTGGACGAGGAGGAGCGCATGCGCATGGCTGAAGGAGGCGTGCAGACCGAGGAGTACAGGACCTTTCTGCAGCAACCGTCTGGAAACATGGACGACAGCGGCTTCTTCTCCATCCAGGTGATCAGCAACGCTCTAGGAGTTTGGGGTTTAGAGATCGTTCTCTTCAACAGCAGAGAGTACCAGCAGTTACAGATCGATCCCATACATGAGAAGGCCTTTATATGTAACTATAAGGAGCACTGGTTCACGGTGCGTAAGCTGGGACAGCAGTGGTTTAATCTGAACTCACTGCTGACCGGACCAGAGCTCATATCAGACACTTACTTGGCTCTTTTCTTAGCGCAGCTGCAACAGGAAGGTTATTCCATCTTTGTGATCCGGGGGAGCCTGCCGGACTGTGAAGCTGATCAGATTTTGCGGATCATGCGAGttgagcagcagcagcggcCCAAGCTGATCGGAGAGGACGAGGCCCAGAGgATGTCAGTGCAGCAGGCGTCCGACCCCGGACACACCACAGATGAAGTGCTGctggatgaggatgaggaggagctGAGGAAGGCTCTggctctcagcagacaggacaTGGAGGTGGAGGACGAGGAGGCTGACCTTCGCAGAGCCATTCAGCTCAGTATGGCAGGTGGCAGCGATCCCAGAAGCCCCAGCGCCACGGTGACGGCCGGCTCGTCTCAGTCAGGAAGCACCGAGAAGGAGGCGCTGACGGCCGAGGAGCTGCGCAGGAGGAGACAGGCGTACTTCGACAGGCAGCAAGCTCAGTCCTCCGCTCACGACAGGAGCGCCGCCGaCGGAGGGAAGGACAGCGGGACCAAACCCAACCAGTGACAGTCCCTCAGCGCCGGTGACAGACGCCCTCGACCCGACCTCTCTTTGGGAATGATGGGACTCACATCTCCTCTCAGAACTGCCCGGGACCGATCGGGTCCCACTGTGTAATAAAGGGACATTCGTTTAGCTTCGCTTCTCCTCTTTGAGTTGAACGAGGTGAAAGGGAAGCGTCTCCCCGGTTCATTCCTCTTCCTCAGACGGACCACGAGCGTGAGGACGGAGCGGTCAGTGCTCGGGTCACTCCTGCATTCTGGGACCACTGGGCTTTACTGGGGTTACTGGATCTCTCTGCTCTTCTCCTCTGTGGACTATAGTGAAGAACTTCTGCTGTCACCGGTGAGCGGCGGGTGACGTGCCCTAGGTAGACAGCATAGTGAGGGCAGACGCTGATGTGGAGTTCAGTCTTCGTTCAGATTCAGATCTTCACTTGTTTTAACCGTTCATCAATCGTTCCTCTTTTGCTGACCGGAAGCAGCTCTTTTGAATCTAGTTTGTGATTTCTCATGGTTTTCACATTCTTTTCTATAATTTCATACGTCTGGTGGCACAGCAGCGTTTCTGAACTCGTTTCACATTCTGCAATAGTTTTTAAGTGATTGGTTATTCTTGCACTCCTATATACACTTattgtttcttaaataaaaaaaaaatcttttttttcctgaaa

Function

GO:

id name namespace
GO:0008242 omega peptidase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU179680 lncRNA downstream 111902 16817606 ~ 16893398 (-) True G121609
TU179726 lncRNA downstream 455116 16549255 ~ 16550184 (-) True G121644
TU179720 lncRNA downstream 521331 16482647 ~ 16483969 (-) True G121639
TU179528 lncRNA downstream 670861 16334043 ~ 16334439 (-) True G121509
TU179526 lncRNA downstream 718897 16286122 ~ 16286403 (-) True G121507
TU179814 lncRNA upstream 118038 17132518 ~ 17132726 (-) True G121715
TU179810 lncRNA upstream 122390 17136870 ~ 17149028 (-) True G121711
TU179816 lncRNA upstream 136032 17150512 ~ 17157229 (-) True G121717
TU179821 lncRNA upstream 153743 17168223 ~ 17210260 (-) True G121721
TU179834 lncRNA upstream 200575 17215055 ~ 17215278 (-) True G121734
XM_043262638.1 mRNA downstream 642 17001561 ~ 17004658 (-) True serpina10b
XM_043262639.1 mRNA downstream 685 17001561 ~ 17004615 (-) False serpina10b
XM_043262637.1 mRNA downstream 5450 16992237 ~ 16999850 (-) True ddx24
XM_043263880.1 mRNA downstream 19195 16979493 ~ 16986105 (-) False asb2b
XM_043263879.1 mRNA downstream 19196 16978538 ~ 16986104 (-) True asb2b
XM_043262311.1 mRNA upstream 15141 17029621 ~ 17034402 (-) False fam98b
XM_043262310.1 mRNA upstream 15141 17029621 ~ 17034402 (-) True fam98b
XM_043262791.1 mRNA upstream 21589 17036069 ~ 17054298 (-) True spred1
XM_043262790.1 mRNA upstream 21589 17036069 ~ 17054293 (-) False spred1
XM_043262315.1 mRNA upstream 201569 17216049 ~ 17276543 (-) False cdin1
TU179448 other downstream 1264814 15738262 ~ 15740486 (-) True G121456
TU179430 other downstream 1315506 15688891 ~ 15689794 (-) True G121438
TU179418 other downstream 1318352 15685539 ~ 15686948 (-) False LOC122361708
TU179062 other downstream 1905376 15083818 ~ 15099924 (-) True crip2
XR_006253025.1 other downstream 1978885 15010826 ~ 15026415 (-) False ptgr2
TU180175 other upstream 947809 17962289 ~ 17963965 (-) False acyp1
TU180176 other upstream 947809 17962289 ~ 17963965 (-) False acyp1
TU180335 other upstream 1264985 18279465 ~ 18281572 (-) False LOC122361613
TU180588 other upstream 1616777 18631257 ~ 18644980 (-) False LOC122361943
TU180607 other upstream 1772402 18786882 ~ 18790880 (-) True G122247

Expression Profile