RNA id: TU186339


Basic Information

Item Value
RNA id TU186339
length 1911
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G126178
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13915738 ~ 13917760 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCACACATTACAGTGCTTTGTGGTTTAAACTGTAGCTCGTTTAACCCGATTTTTTATGTCAAATCATAACTGAGGTTTACCGTGGAACTCAATGTCGGTCTCAGGATAATAATCTGATATTTGTGCCAAATTTTTACTCAATTTGTTCCCATTAAATCcaacatttaatcaaataagaAGTTGTGCAAGAGATAATCTGGACTTAAAAGAATCTCGTAAGAAACATTTAAGAATAAATTGCAATTTACGACTTGATTGCAGACTCTGCATGAGAACATGAGACACAGTTCTGTAGTGAAATTGTAGGAGAGAGAAGACAACTGTTTTTCTCTGAGCTTGTTCTCATTAAAAACCCAAAAGTAACTAGACTACGAGAAACGAAATTGCAATCTCTGAGCGCAGCATGTCAAACTTTGACTCGCCTCTGTTTGCTCTCCATTTAACAAACAGAGGCGAGAACAGTCTGAGAAATTCTCATTTCTGATATTTCGCTCTCACGagctaaaaaagaaagaacagaatGAGCTAAAGAGAGCGAAACTGTGAAAAGCACAGGCGGCCGTGCGAGAGGAAGCGGGCTGCACGTTGCCGCTGGTTTCTCCTCAGCGCCGCACGCTGTGATTTGCGGCTAAAAATATCCACCACATGACTGAGTCGcattcacaaacacatgcacaggaCGGGaggggaggagaaagaaaagagacagACGCAGAGAGGGAGTTCGGGGGCACAGGTgcataaaagaacaaaagatggggggaaaaaaaaggaaagggagTGGAGTTTGGAGGAGCGGCGGAAGAATATAAAAAAGGAGGGCGGCACTGCAGTTGGCCGCGTGCCACGACACGTGACGACCGACACGGAGAGACGAGAGGAGACTTCACAAAACACCAGGCCCGGATGCGAGCACAAAGCATCCCCAAAACCAGCGGTAAAAGGCGCTCTTACCAGGCGAGTTTGAAGCCTCTCATTGGTGCGATGCTGAGAGCGTGTTTGATACGGCGTCAGGCGGCTGCGGTCGGAGAGGCTGCATGTTGGTGATGGGCAGCCGCTGAGGAGAGAAAACGTCCCGCTGTGCCGTCCCATTCAGAGAGGTGATGGTCTACGTACTCACCTGAACTGACTCTAACACTAACGGGGTCCCCGAGCATCCAGGCGGTCCCATATAACGCCGCAGGACCGGTCCGATCGACCAAACGCTGCCGAAGTTAAAAGCTGCAGTCTCTGAGCCGAGAGCGATACTGAGCATGCTCATCAGCCTTTCCTCTCCCTCCCTCGCTCTGCTTTTCTCAGATTGTTTGGTTAGCTGCGACTGTCCCCTCCGGTCAGGTCAGATGAGGTGGGTTTGCGTCGCTCTGAGATTATGAGGACCTGTTGCCCTCCCATCAGACACAATTAAGTCTCCACCATCGGCGGCCGGAGACACTAATCTGCTAATGCACGCGCACcatggctctgttccaaaagcaaaaaaaaaaaagatcgcAATTTTAACGGTAAATGACTGCAGTGAAACCTGCTACTTGGGTGAAGATACGTAGAGATGGCGCagactgtaataaatataacgGAGCGTTACGGTAAATTACTGTTAAATGTGCATGTGCTTGAAAGTGAAAATcgcattaaaaagtaaaaaaaaaaaacttttcagtgAAACAACTGCTTCTCATTTGTTTTCCCCTCTTATCGGTTTTATATAACATCCCATTTAATCAAGAAGTTGTGCAACAGATAATCTGGACTTGAACGAATCTTGCAAAAAACTATTGagacaaaactgcattttttatatGGTTAACTTATATGGTTAATTAATGCACAAAATTAATCatataatctattttttttatagtcatGTTTGTTATGACAGcgatttgtgtttatgtgtttgcaCATCTTCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186293 lncRNA upstream 28241 13833644 ~ 13887497 (+) True G126143
TU186318 lncRNA upstream 49099 13861937 ~ 13866639 (+) False lbhl
TU186286 lncRNA upstream 75606 13809279 ~ 13840132 (+) True G126139
TU186247 lncRNA upstream 209624 13670289 ~ 13706114 (+) False daw1
XR_006246951.1 lncRNA upstream 223180 13632076 ~ 13692558 (+) False LOC122323141
TU186344 lncRNA downstream 4086 13921846 ~ 13922131 (+) True G126183
TU186345 lncRNA downstream 4397 13922157 ~ 13922424 (+) True G126184
TU186346 lncRNA downstream 5075 13922835 ~ 13923229 (+) True G126185
TU186347 lncRNA downstream 7869 13925629 ~ 13925860 (+) True G126186
TU186349 lncRNA downstream 10524 13928284 ~ 13929057 (+) True G126188
XM_043216855.1 mRNA upstream 42473 13870029 ~ 13873265 (+) True LOC122323172
XM_043216856.1 mRNA upstream 46406 13861871 ~ 13869332 (+) True lbhl
XM_043216801.1 mRNA upstream 211011 13695123 ~ 13704727 (+) True daw1
XM_043216803.1 mRNA upstream 318524 13594302 ~ 13597214 (+) True sertad3
XM_043216805.1 mRNA upstream 321589 13591816 ~ 13594149 (+) True blvrb
XM_043264016.1 mRNA downstream 205636 14123396 ~ 14126844 (+) True rbm7
XM_043263900.1 mRNA downstream 212739 14130499 ~ 14147187 (+) True barx2
XM_043216498.1 mRNA downstream 660410 14578170 ~ 14583254 (+) True smtla
XM_043264916.1 mRNA downstream 786400 14704160 ~ 14727887 (+) True fli1
XM_043263957.1 mRNA downstream 834422 14752182 ~ 14775393 (+) True kcnj5
TU186336 other upstream 2938 13909564 ~ 13912800 (+) True G126175
TU186277 other upstream 233167 13679045 ~ 13682571 (+) True G126132
TU185911 other upstream 484973 13427097 ~ 13430765 (+) False rpl35a
XR_006253129.1 other upstream 697392 13216657 ~ 13218346 (+) False LOC122362547
XR_006253128.1 other upstream 697401 13216484 ~ 13218337 (+) False LOC122362547
TU186297 other downstream 22335 13940095 ~ 13941369 (+) True G126146
TU186575 other downstream 909121 14826881 ~ 14828292 (+) True gemin7
TU186588 other downstream 989507 14907267 ~ 14908483 (+) False LOC122322993
TU186589 other downstream 991438 14909198 ~ 14909676 (+) False LOC122322993
TU186953 other downstream 2034259 15952019 ~ 15953653 (+) False LOC122362954

Expression Profile