RNA id: TU186345


Basic Information

Item Value
RNA id TU186345
length 268
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G126184
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13922157 ~ 13922424 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

caatagccaaaaatacattgtgtagGGCAAAAttgtccatttttctttttcatgggATATTACGTAAAgatcatgttttgtaaatttcttgtaagaaaatgtacacattttttgtAAGGACTGCACTTTAGCAACTTTCATGAGGGCAATTTtctcagtgttttattattctttttttgcaacCTCGGTTTCCGGATTACTTCAgatagttgcatctcagccagatattgtcctatcataacaaaccatacgtCAATTCATGTTTTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186344 lncRNA upstream 26 13921846 ~ 13922131 (+) True G126183
TU186339 lncRNA upstream 4397 13915738 ~ 13917760 (+) True G126178
TU186293 lncRNA upstream 34660 13833644 ~ 13887497 (+) True G126143
TU186318 lncRNA upstream 55518 13861937 ~ 13866639 (+) False lbhl
TU186286 lncRNA upstream 82025 13809279 ~ 13840132 (+) True G126139
TU186346 lncRNA downstream 411 13922835 ~ 13923229 (+) True G126185
TU186347 lncRNA downstream 3205 13925629 ~ 13925860 (+) True G126186
TU186349 lncRNA downstream 5860 13928284 ~ 13929057 (+) True G126188
TU186353 lncRNA downstream 25728 13948152 ~ 13949364 (+) True G126192
TU186447 lncRNA downstream 146180 14068604 ~ 14068871 (+) True G126243
XM_043216855.1 mRNA upstream 48892 13870029 ~ 13873265 (+) True LOC122323172
XM_043216856.1 mRNA upstream 52825 13861871 ~ 13869332 (+) True lbhl
XM_043216801.1 mRNA upstream 217430 13695123 ~ 13704727 (+) True daw1
XM_043216803.1 mRNA upstream 324943 13594302 ~ 13597214 (+) True sertad3
XM_043216806.1 mRNA upstream 328008 13591939 ~ 13594149 (+) False blvrb
XM_043264016.1 mRNA downstream 200972 14123396 ~ 14126844 (+) True rbm7
XM_043263900.1 mRNA downstream 208075 14130499 ~ 14147187 (+) True barx2
XM_043216498.1 mRNA downstream 655746 14578170 ~ 14583254 (+) True smtla
XM_043264916.1 mRNA downstream 781736 14704160 ~ 14727887 (+) True fli1
XM_043263957.1 mRNA downstream 829758 14752182 ~ 14775393 (+) True kcnj5
TU186336 other upstream 9357 13909564 ~ 13912800 (+) True G126175
TU186277 other upstream 239586 13679045 ~ 13682571 (+) True G126132
TU185911 other upstream 491392 13427097 ~ 13430765 (+) False rpl35a
XR_006253129.1 other upstream 703811 13216657 ~ 13218346 (+) False LOC122362547
XR_006253128.1 other upstream 703820 13216484 ~ 13218337 (+) False LOC122362547
TU186297 other downstream 17671 13940095 ~ 13941369 (+) True G126146
TU186575 other downstream 904457 14826881 ~ 14828292 (+) True gemin7
TU186588 other downstream 984843 14907267 ~ 14908483 (+) False LOC122322993
TU186589 other downstream 986774 14909198 ~ 14909676 (+) False LOC122322993
TU186953 other downstream 2029595 15952019 ~ 15953653 (+) False LOC122362954

Expression Profile