RNA id: TU186349



Basic Information


Item Value
RNA id TU186349
length 774
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G126188
representative True

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13928284 ~ 13929057 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACCTACTTGTGCAGAAAAGCAGCTTGACACAACAACAAAGAACTTCTACATTTCCTCAGAAAGAAGCGCCGAAGATGGTGTACACCGCATTTCTCTCACCTTATCGCTCTCGATTCTCTTTCTCGTTTCTCGTAAATGGAGTTTCTCCAGTACAGTGGCCATGCTGTGGCGTGCTGGGTTGAGTTGTGCTGTAGATCGCGAGGAGGAGAGAGGGTGAGGGTGACGGGGTTATGTAAATGGCAGAACCGCTGTGGCTGTGAGTAATCTGAGGCTAATTCTGGCTGCGGCTGGGAGACACCATGATGGAGGGATTTGCACTCGTCCGCTGCTCTACAGAGGGAACCATAGAGCCTGCGGCCGATGGCCTCATCCGGAGTCACACACTTCACCTGGACTGACCCTCCTCGGGGTTCAAGAGCTTCATATTCTAGAGACTCTATATAACACTGTACGCGAGCGAAAGCATTCAAATGCACCAGGAGctcttatttcaaataaaattacattgacAATGTTAATGTGTTCGGTCTTGACTGAACAGATCCGCTGTGAGCGTGTAGGAAATACTTCTGCTGTAAGTACAAGCGTGCACGAATCACCTCGCAGTcaatctatacaggtggagggtttctgaagcgCTCTGCCAAACTGCTACGACAAACAGAAGCCAGGTATCTGGATATTGAGCAGAGAGCTCATTGGCTACCGATGCAGGAGAAAACCAATCAGCTGTGTCGTGTGATGACGATGTCATAAAGTCAGATTGAGTTAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU186347 lncRNA upstream 2424 13925629 ~ 13925860 (+) True G126186
TU186346 lncRNA upstream 5055 13922835 ~ 13923229 (+) True G126185
TU186345 lncRNA upstream 5860 13922157 ~ 13922424 (+) True G126184
TU186344 lncRNA upstream 6153 13921846 ~ 13922131 (+) True G126183
TU186339 lncRNA upstream 10524 13915738 ~ 13917760 (+) True G126178
TU186353 lncRNA downstream 19095 13948152 ~ 13949364 (+) True G126192
TU186447 lncRNA downstream 139547 14068604 ~ 14068871 (+) True G126243
TU186455 lncRNA downstream 191136 14120193 ~ 14120850 (+) True G126251
TU186468 lncRNA downstream 446508 14375565 ~ 14442503 (+) True G126262
TU186500 lncRNA downstream 541703 14470760 ~ 14471015 (+) True G126285
XM_043216855.1 mRNA upstream 55019 13870029 ~ 13873265 (+) True LOC122323172
XM_043216856.1 mRNA upstream 58952 13861871 ~ 13869332 (+) True lbhl
XM_043216801.1 mRNA upstream 223557 13695123 ~ 13704727 (+) True daw1
XM_043216803.1 mRNA upstream 331070 13594302 ~ 13597214 (+) True sertad3
XM_043216806.1 mRNA upstream 334135 13591939 ~ 13594149 (+) False blvrb
XM_043264016.1 mRNA downstream 194339 14123396 ~ 14126844 (+) True rbm7
XM_043263900.1 mRNA downstream 201442 14130499 ~ 14147187 (+) True barx2
XM_043216498.1 mRNA downstream 649113 14578170 ~ 14583254 (+) True smtla
XM_043264916.1 mRNA downstream 775103 14704160 ~ 14727887 (+) True fli1
XM_043263957.1 mRNA downstream 823125 14752182 ~ 14775393 (+) True kcnj5
TU186336 other upstream 15484 13909564 ~ 13912800 (+) True G126175
TU186277 other upstream 245713 13679045 ~ 13682571 (+) True G126132
TU185911 other upstream 497519 13427097 ~ 13430765 (+) False rpl35a
XR_006253129.1 other upstream 709938 13216657 ~ 13218346 (+) False LOC122362547
XR_006253128.1 other upstream 709947 13216484 ~ 13218337 (+) False LOC122362547
TU186297 other downstream 11038 13940095 ~ 13941369 (+) True G126146
TU186575 other downstream 897824 14826881 ~ 14828292 (+) True gemin7
TU186588 other downstream 978210 14907267 ~ 14908483 (+) False LOC122322993
TU186589 other downstream 980141 14909198 ~ 14909676 (+) False LOC122322993
TU186953 other downstream 2022962 15952019 ~ 15953653 (+) False LOC122362954

Expression Profile