RNA id: TU186447


Basic Information

Item Value
RNA id TU186447
length 268
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G126243
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 14068604 ~ 14068871 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTTTCAAAAAGTCTGATCTGTGGACCTCAATAAGAAATCTTttatattagtagtagtattagtattacAATTATTAGAACGTGTGTGAAAATATACCAGCTTTTTGAGATTTTATAGCTTTTACAGTAAAGCTTATACCAAAAAATATACGTTTTCAcaacccctttttttttttaataagtggAAGTCCAGTTTATTTCAGTAAAGCAGTGTGTTAACAatgattgttaaaataaaataaatcctaaTAAAAACCAATAATTACGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186353 lncRNA upstream 119240 13948152 ~ 13949364 (+) True G126192
TU186349 lncRNA upstream 139547 13928284 ~ 13929057 (+) True G126188
TU186347 lncRNA upstream 142744 13925629 ~ 13925860 (+) True G126186
TU186346 lncRNA upstream 145375 13922835 ~ 13923229 (+) True G126185
TU186345 lncRNA upstream 146180 13922157 ~ 13922424 (+) True G126184
TU186455 lncRNA downstream 51322 14120193 ~ 14120850 (+) True G126251
TU186468 lncRNA downstream 306694 14375565 ~ 14442503 (+) True G126262
TU186500 lncRNA downstream 401889 14470760 ~ 14471015 (+) True G126285
XR_006246940.1 lncRNA downstream 671915 14740786 ~ 14743444 (+) True LOC122323060
TU186590 lncRNA downstream 840958 14909829 ~ 14910157 (+) False LOC122322993
XM_043216855.1 mRNA upstream 195339 13870029 ~ 13873265 (+) True LOC122323172
XM_043216856.1 mRNA upstream 199272 13861871 ~ 13869332 (+) True lbhl
XM_043216801.1 mRNA upstream 363877 13695123 ~ 13704727 (+) True daw1
XM_043216803.1 mRNA upstream 471390 13594302 ~ 13597214 (+) True sertad3
XM_043216806.1 mRNA upstream 474455 13591939 ~ 13594149 (+) False blvrb
XM_043264016.1 mRNA downstream 54525 14123396 ~ 14126844 (+) True rbm7
XM_043263900.1 mRNA downstream 61628 14130499 ~ 14147187 (+) True barx2
XM_043216498.1 mRNA downstream 509299 14578170 ~ 14583254 (+) True smtla
XM_043264916.1 mRNA downstream 635289 14704160 ~ 14727887 (+) True fli1
XM_043263957.1 mRNA downstream 683311 14752182 ~ 14775393 (+) True kcnj5
TU186297 other upstream 127235 13940095 ~ 13941369 (+) True G126146
TU186336 other upstream 155804 13909564 ~ 13912800 (+) True G126175
TU186277 other upstream 386033 13679045 ~ 13682571 (+) True G126132
TU185911 other upstream 637839 13427097 ~ 13430765 (+) False rpl35a
XR_006253129.1 other upstream 850258 13216657 ~ 13218346 (+) False LOC122362547
TU186575 other downstream 758010 14826881 ~ 14828292 (+) True gemin7
TU186588 other downstream 838396 14907267 ~ 14908483 (+) False LOC122322993
TU186589 other downstream 840327 14909198 ~ 14909676 (+) False LOC122322993
TU186953 other downstream 1883148 15952019 ~ 15953653 (+) False LOC122362954
TU187042 other downstream 1984007 16052878 ~ 16055627 (+) False LOC122362745

Expression Profile