RNA id: TU187411


Basic Information

Item Value
RNA id TU187411
length 380
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G126906
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17278206 ~ 17278585 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aaaatagaaaagataaacaaaaaatgattaaaagctCATTTCAAATACTGAAACGATGTGTATTATGAAAAGCACTATAGAAATAAATCTGACCTGACTCCGCCCCAGCTAAAGCTGGCCATCTGATCAGAGCCTGGCTAGGCCGTAATGAATGCTTGTAATTGTTAAGTGCGACGCCAGCGCTAATTGATCACCAGGTGCTGCCGCAGCAGATAGAGTTACAGTTTGAAGAGCCCAGCCGCGAGGAAAGACGTGTTTTTCCATCACACTTTGAGTCGCTGCGGGCCTGACCTTCTCCTCCTGCGGTCACGCCTGGATTCTCCTGATGGACACAAACTCTCTCAGATCACCGGATCTGCTTAGAAACGCTCCCGGGTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU187407 lncRNA upstream 20843 17256811 ~ 17257363 (+) True G126903
TU187393 lncRNA upstream 105901 17172005 ~ 17172305 (+) True G126893
TU187379 lncRNA upstream 106871 17129922 ~ 17171335 (+) False LOC122362575
XR_006253132.1 lncRNA upstream 107222 17129970 ~ 17170984 (+) False LOC122362575
TU187378 lncRNA upstream 110285 17129922 ~ 17167921 (+) True LOC122362575
TU187696 lncRNA downstream 132100 17410685 ~ 17411593 (+) False G127098
TU187697 lncRNA downstream 132281 17410866 ~ 17411593 (+) False G127098
TU187699 lncRNA downstream 132281 17410866 ~ 17411593 (+) False G127098
TU187700 lncRNA downstream 132281 17410866 ~ 17411593 (+) False G127098
TU187705 lncRNA downstream 166376 17444961 ~ 17446064 (+) True G127103
XM_043264794.1 mRNA upstream 178644 17079059 ~ 17099562 (+) True LOC122362967
XM_043264314.1 mRNA upstream 208387 17067094 ~ 17069819 (+) True LOC122362752
XM_043264852.1 mRNA upstream 306842 16958824 ~ 16971364 (+) True LOC122363001
XM_043264457.1 mRNA upstream 448852 16819287 ~ 16829354 (+) True ulk3
XM_043264649.1 mRNA upstream 488533 16780682 ~ 16789673 (+) True larp6a
XM_043216503.1 mRNA downstream 25184 17303769 ~ 17306045 (+) True LOC122322904
XM_043264317.1 mRNA downstream 47381 17325966 ~ 17354848 (+) True unc13c
XM_043216683.1 mRNA downstream 146569 17425154 ~ 17425977 (+) True ompa
XM_043216533.1 mRNA downstream 158566 17437151 ~ 17440065 (+) True LOC122322924
XM_043216880.1 mRNA downstream 175569 17454154 ~ 17455657 (+) True serp1
TU187377 other upstream 113449 17129922 ~ 17164757 (+) False LOC122362575
TU187380 other upstream 113449 17129922 ~ 17164757 (+) False LOC122362575
TU187381 other upstream 201047 17074194 ~ 17077159 (+) True G126884
TU187265 other upstream 459807 16817731 ~ 16818399 (+) False G126820
TU187112 other upstream 1006939 16264758 ~ 16271267 (+) False LOC122362750
TU187389 other downstream 25235 17303820 ~ 17305974 (+) False LOC122322904
TU187390 other downstream 25235 17303820 ~ 17309158 (+) False LOC122322904
TU187698 other downstream 132281 17410866 ~ 17411593 (+) True G127098
TU187881 other downstream 530089 17808674 ~ 17812167 (+) False G127239
XR_006253166.1 other downstream 605080 17883665 ~ 17887211 (+) True sdr42e1

Expression Profile