RNA id: XM_043263957.1


Basic Information

Item Value
RNA id XM_043263957.1
length 2707
RNA type mRNA
GC content 0.49
exon number 4
gene id kcnj5
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 14752182 ~ 14775393 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAGTTGCGTAAATCTCAGCCCGCAGAATGCAACTCGTTGTGCGCTAGGATGCTTCCACGCACACGCAAGTACGGAAAGGACAAATCCTGCGAGGGGAGACGGAGGAGCAGGGGGCTGTGGGGGAGGAAACATCCTCTCATGCTCACTTTCacatccctccctctctctctttctctcactcgcTTGCATCCTCCAGGAGAGCGAGGTAAGGAGGTGGTGGAGCGCTGTGTGAGCCGAGGCAGTGAGGCAGCTGAGATGAGCACATCAGAGCTGGAGTCAGAACAGAGCGCAGCTGCCCTAACATGCTTCCCTTGACACTGCACAGCTACCTCTGCGCTCGAATGAAGGTTTGCAGTCGAAGCTGAGGATGGCAGGAGATTCTCGCGTCCACATGGACCACGACATGGAGATTGGAGTAACTCCAAGAGAGCAGGTGAAGAAACTCCCCAAGCACCTGAGGGAAGCACAAATACCCACAGATCGCACCCACCTCATCTCTGATCCTGTTAAGAAACCCCGCCAGCGCTACGTACAGAAAGACGGCAAGTGCAATGTTCATCACGGAAACGTTCAAGAGACCTATCGTTATCTCAGCGACCTCTTCACAACACTGGTCGACTTACGCTGGCGCCtcagtttctttattttcacCTTGGTCTACGTGGTCAACTGGCTCTTCTTTGGGTTTTTGTGGTGGCTTATCGCGCTAATACGAGGAGATCTTCTACACGCAGATGAAGAGGGCTGGACCCCTTGTGTTGAAAACCTCAACAGCTTTGTCTCGGCTTTTCTCTTTTCCATCGAAACTGAGACCACCATTGGTTACGGCTATCGTGTCATCACGGAGAAGTGCCCAGAAGGGATTATACTTCTATTGGTGCAGGCCATCTTGGGGTCCATCGTCAATGCCATGATGGTgggctgcatgtttgtaaagaTCTCGCAGCCCAAGAACCGAGCAGAGACGCTGATGTTCTCCCACAAGGCTGTGATCTCGGTGAGGGATAACAAGATGTGCCTGATGTTCAGAGTGGGTGACCTGCGCAATTCGCACATTGTGGAAGCGTCAATCCGTGCCAAACTCATTCGTTCACAGCAGACGAAGGAGGGCGAGTTCATACCTCTCAACCAGACGGACATCAACATTGGCTTTGACACAGGAGACGATCGCCTCTTCCTGGTATCGCCTCTTATTATCTCTCACGAGATCAATGAGAAGAGTCCTTTCTGGGAGATGTCCCGGGCACAGATGGAGAAGGAAGAGTTCGAGATTGTCGTCATCTTGGAGGGCATGGTCGAAGCTACAGGCATGACGTGTCAAGCGCGCAGCTCCTACCTGGACTCGGAAGTGCTGTGGGGCTACCGCTTCACCCCGGTGCTTTCTCTGGAAAAGGGCTTCTACGAAGTCGACTACAACAACTTCCACGACATTTACGAGACCAACACCCCAACCTGTAGCGCTAAAGAACTGTCCGCTCGATTAAAAGAGAGCCCTCTCCTGCCTCACCTGCCTCTCCTCAGCCCCGACCTCAGGCAGCACACAGACCCCTTCTCCAGCCAGACCACACAGGACGAGCGGGAGAAAGACGACGAGAAGCCCGCGGAGACCAACAACGGCTCTGCCAACCGCTTGGAGGAGAACCCTTGAAGGAAACCCTGCTCCGAACTGACTCAAGGACTCAGTCTGTAGAGACTGGCAAGCTTCTTTCCCCTCGCATGGAGAAATATCCTTGCAATAGCCATGCAATATGACCCCCGATTCCTCTAGAGAGCCGAGCTGATGTGTAGATCGAGGTTAGACGCACAAACAGATGAGAATccgtatatatttatacacctaCGCATACTACACatattttagctttataaaCTCTGTTGTGCAGATTTTCATGGTATCAGTCAACGCCCTGTACCTCAAGGACAAAATAGTAGCCATATACTGTATGACCCAGAGGTCAAACCCCTTAATCTAACCATAGCAAATCAGCTTTAATAGAATCCCAATGCAAAGACTCTTAGGAGCCGAACACAGTGCTTGCGTGATTAACCACCGCGAAGGCCCGCGACGTTGGTTCCTTTAAGCTATTCTATTGTATGTTTTATCTGCattataattatgcattataattatcGATTTCCCCCTCATATTGAAGTGCAtgtgtttgaatttgatgcaaGAGTGATGCTGGAAAACGCACCAGACTAAAGCACAACCGCTGCAGAGGCAGATGTATGGTTTGAAAGCCTGCAGTGCACTAAAATAGCGGCGACGAATGGAAATATCGCACATGCATTGTCTCTGTGAAGTTCAATCTTGCCCGGTCCACGCTCCTGGACTCGTATTTCGTCTCTATCACATTTGATTTGTGTGCAAGTTTGAGGCCACGCGCGTGAGACTGTCAGTCGCAATTTCCAAGCGGCCCAAAGAACTGCGTTTCAAAAGCATGAACCCTAAGGCAAGTTCTACACACTTTCTAAACAGGGTATTTTCTAAGGCATGCAGACTTCAAAAACTCAAACACTTTCTACAAACAATTGTACAGTTAAATTCTGGGTTAAGGTGAGGAGAGAGCTCCATTCACAGCAGAGACAACGGTGCAGTattttaaagatgcattttaGAGGAAACTCACCTATGACAAGTCATTTTCACAGAATAATATTATATGCAGgctatttacataaataaaataaataaagaaactta

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015467 G-protein activated inward rectifier potassium channel activity molecular_function

KEGG:

id description
K04999 KCNJ5, KIR3.4; potassium inwardly-rectifying channel subfamily J member 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006246940.1 lncRNA upstream 8738 14740786 ~ 14743444 (+) True LOC122323060
TU186500 lncRNA upstream 281167 14470760 ~ 14471015 (+) True G126285
TU186468 lncRNA upstream 309679 14375565 ~ 14442503 (+) True G126262
TU186455 lncRNA upstream 631332 14120193 ~ 14120850 (+) True G126251
TU186447 lncRNA upstream 683311 14068604 ~ 14068871 (+) True G126243
TU186590 lncRNA downstream 134436 14909829 ~ 14910157 (+) False LOC122322993
TU186586 lncRNA downstream 156928 14932321 ~ 14984748 (+) True G126347
TU186584 lncRNA downstream 161532 14936925 ~ 14937634 (+) True G126345
TU186722 lncRNA downstream 259990 15035383 ~ 15047877 (+) False LOC122362588
TU186725 lncRNA downstream 290953 15066346 ~ 15066577 (+) True G126458
XM_043264916.1 mRNA upstream 24295 14704160 ~ 14727887 (+) True fli1
XM_043216498.1 mRNA upstream 168928 14578170 ~ 14583254 (+) True smtla
XM_043263900.1 mRNA upstream 604995 14130499 ~ 14147187 (+) True barx2
XM_043264016.1 mRNA upstream 625338 14123396 ~ 14126844 (+) True rbm7
XM_043216855.1 mRNA upstream 878917 13870029 ~ 13873265 (+) True LOC122323172
XM_043264096.1 mRNA downstream 51395 14826788 ~ 14827678 (+) False gemin7
XM_043264097.1 mRNA downstream 51472 14826865 ~ 14827678 (+) False gemin7
XM_043216812.1 mRNA downstream 67818 14843211 ~ 14850376 (+) True bmp16
XM_043264627.1 mRNA downstream 96375 14871768 ~ 14901407 (+) True ppp1r37
XM_043216605.1 mRNA downstream 131223 14906616 ~ 14910141 (+) True LOC122322993
TU186297 other upstream 810813 13940095 ~ 13941369 (+) True G126146
TU186336 other upstream 839382 13909564 ~ 13912800 (+) True G126175
TU186277 other upstream 1069611 13679045 ~ 13682571 (+) True G126132
TU185911 other upstream 1321417 13427097 ~ 13430765 (+) False rpl35a
XR_006253129.1 other upstream 1533836 13216657 ~ 13218346 (+) False LOC122362547
TU186575 other downstream 51488 14826881 ~ 14828292 (+) True gemin7
TU186588 other downstream 131874 14907267 ~ 14908483 (+) False LOC122322993
TU186589 other downstream 133805 14909198 ~ 14909676 (+) False LOC122322993
TU186953 other downstream 1176626 15952019 ~ 15953653 (+) False LOC122362954
TU187042 other downstream 1277485 16052878 ~ 16055627 (+) False LOC122362745

Expression Profile