RNA id: XM_043264317.1


Basic Information

Item Value
RNA id XM_043264317.1
length 1794
RNA type mRNA
GC content 0.56
exon number 13
gene id unc13c
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17325966 ~ 17354848 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGTACAAGGGAATCATTCGCTTCCAGCACAATGCGTTTTTCTGCGCTGTGGAGAAGAGCTCAAAACACGGAGCCGAGGACAAGACCCAAAACATCATCATGGCTATGAAGGAACGGATGAAGATCAGAGAGAAGAACCGGCCCGAGGTGTTCGAGGTGATCCAGGAGATGTTTCTGCTCTCGAAGGAGGATTTGAGCGCTCACCTGAAGACGGCCAAGCAGGCTGTGCTGGAGGGAACGTCCAAGTGGTCCGCCAAAATCACCATCACAGTTGTATGTGCTCAAGGTCTGCAAGCCAAAGACAAGACGGGCTCCAGCGACCCCTACGTCACTGTGCAAGTGGGGAAGACCAAACGCAGGACCAAAACCGTTTTTGGAAATCTCAACCCGGTCTGGGAGGAGAAGTTCTTCTTcGAGTGTCATAACGCCACAGACCGTATAAAGGTTCGTGTTTGGGATGAAGACGATGACATAAAGTCCAGGGTGAAGCAGCACTTTAAGAAGGAATCTGATGATTTCTTGGGCCAGACCATCATCGAGGTGCGCATGCTGAGCGGGGAGATGGACGTCTGGTATAATCTCGAGAAGCGGACGGATAAGTCGATGGTGTCGGGGGCCATCAGGCTGAAGATCAGCGTGGAGATGAAGGGAGAAGAGAAGGTGGCTCCTCCTCACGGACAGTACACATGTTTACATGAGAATCTCTTCCACTACCTGACGGAGGTGAAGAGCGGCGGGGTGGTGAAGATCCCGGAGGTCAAAGGTGACGATGCCTGGAAGGTGTACTTCGACGACGTGTCTCAGGAGATCGTGGATGAGTTCGCCATGCGCTTCGGCGTGGAGTCCATCTACCAGGCCATGACACATTTCTCATGTCTCTCGTCCAAGTACATGTGTCCCGGCGTTCCCGCGGTGATGAGTAACCTGCTCGCCAACATCAACGCCTACTTCGCTCACACAACAACAGCAACCACCAACATCTCAGCCTCCGACCGATTCGCAGCATCCAACTTTGGGAGAGAGAAGTTCGTCAAACTCCTGGACCAGCTTCACAACTCTCTGCGCATCGACCTCTCCAAGTACCGGGACAACTTCCCTGCTGGAAATCCAGAGAGACTTCAGGACTTGAAATCAACCGTCGACCTGCTGACGAGCATCACCTTCTTCAGGATGAAGGTACGAcgctCGCCATGGAGCACCAGCCGCTTGTCTCGTGGTCTGGCCGGCCCGTACGGGCCGCCAGTGAGAGCTACCAGCGCCAAAGCTCCAGCCGGGAGTGCTGCTGCAGTCGGGTTTAACTCAAACCTGGTCACCTCAGGGTCCGTGGTGCTGCTGGTGCTGGCGCGCCTCTTCACAATTTACATCGCTCCTGCTGCTGGTGAGACCTCTGACCAGCGGAGCTCCAGCCGCCTTCTCCCTGATGCTAACGCTGCGGTTGATGTTGCAGGTCCTGGTTGCAGGTCTTCTCCGGCGACAGAGGCTTTACCTTCACTGGAGCCACAAGGTGATGTGGCTTCCGCCGATCAGAGGAGTCTGGTTCAGGAGAGCTGGACCTGGATCTTCAGCAGACGCCTGGAGATCACGCCTCCATCGAGGCTCTGCAGGAGGGAGAACATCGTCCGCCTCAACCTGTACTACAGCTACATGTCCCAGGAGCAGATCAGCCAGCCGTGGCTGTACTCTCTGGTGCGTCTGCGTTCACTGGCTTGCACCATCAAGCGCTGCGCACCCATCGGCAAGACTGCTCTGGCAGAGCTATTCCTCATGCTAGTCCTTGATCTCACCTCGGACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU187411 lncRNA upstream 47381 17278206 ~ 17278585 (+) True G126906
TU187407 lncRNA upstream 68603 17256811 ~ 17257363 (+) True G126903
TU187393 lncRNA upstream 153661 17172005 ~ 17172305 (+) True G126893
XR_006253132.1 lncRNA upstream 154982 17129970 ~ 17170984 (+) False LOC122362575
TU187696 lncRNA downstream 55837 17410685 ~ 17411593 (+) False G127098
TU187697 lncRNA downstream 56018 17410866 ~ 17411593 (+) False G127098
TU187699 lncRNA downstream 56018 17410866 ~ 17411593 (+) False G127098
TU187700 lncRNA downstream 56018 17410866 ~ 17411593 (+) False G127098
TU187705 lncRNA downstream 90113 17444961 ~ 17446064 (+) True G127103
XM_043216503.1 mRNA upstream 19921 17303769 ~ 17306045 (+) True LOC122322904
XM_043264794.1 mRNA upstream 226404 17079059 ~ 17099562 (+) True LOC122362967
XM_043264314.1 mRNA upstream 256147 17067094 ~ 17069819 (+) True LOC122362752
XM_043264852.1 mRNA upstream 354602 16958824 ~ 16971364 (+) True LOC122363001
XM_043264457.1 mRNA upstream 496612 16819287 ~ 16829354 (+) True ulk3
XM_043216683.1 mRNA downstream 70306 17425154 ~ 17425977 (+) True ompa
XM_043216533.1 mRNA downstream 82303 17437151 ~ 17440065 (+) True LOC122322924
XM_043216880.1 mRNA downstream 99306 17454154 ~ 17455657 (+) True serp1
XM_043216871.1 mRNA downstream 102242 17457090 ~ 17478956 (+) True lrch3
XM_043216873.1 mRNA downstream 102244 17457092 ~ 17482180 (+) False lrch3
TU187390 other upstream 16808 17303820 ~ 17309158 (+) False LOC122322904
TU187389 other upstream 19992 17303820 ~ 17305974 (+) False LOC122322904
TU187377 other upstream 161209 17129922 ~ 17164757 (+) False LOC122362575
TU187380 other upstream 161209 17129922 ~ 17164757 (+) False LOC122362575
TU187381 other upstream 248807 17074194 ~ 17077159 (+) True G126884
TU187698 other downstream 56018 17410866 ~ 17411593 (+) True G127098
TU187881 other downstream 453826 17808674 ~ 17812167 (+) False G127239
XR_006253166.1 other downstream 528817 17883665 ~ 17887211 (+) True sdr42e1
TU187918 other downstream 568080 17922928 ~ 17928165 (+) True G127258
TU187919 other downstream 571252 17926100 ~ 17928165 (+) False G127258

Expression Profile