RNA id: XM_043264608.1


Basic Information

Item Value
RNA id XM_043264608.1
length 4156
RNA type mRNA
GC content 0.54
exon number 23
gene id kifc3
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13302536 ~ 13337442 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGCGGCTCAGATTCCACCGTTACCAAGGAACAGCGACAGGAAGAACGGCGTTCGTGTCAGaacgagagtgtgtgtgtgtgaggagaggaGCTGCATGCAGAcgcgagtgtgtgcgtgtgacaCACAAAGCGAGCGCGAGAGGGACGGTTTAGCTGGTGGCGGAGCGGCACTGAAATCGgcggtggtgtgtgtgtgtacatgagagtgtgtgcgcgctccaaataaatgctataaaatgaaGGCATGAGCGACGGCAGGAGACCGCAGGGACAGAGCCGGTCCAGCGGTGTGGTCTGCTCGGCCCTGCGGTCATGTACGGCACAAGAAAGACCTGGGACGTCGGCCACACCCCCTGCCTGCAGGAGCTTTGGAACAAAGACCTCTCATTGGATGTTTCAGCGAGTTCCCTGGATATCCTGATGAGTGATGGTGAGGAGGAGAGCTCCTTCCTCTCGTTGCCCAACACTGTCCTTCAGCGCCActgtttgacctctgacctctctgaAACGGCCACCTCAGAACAGCAGAAGCTGCTCATACAGACTCTGCAAGAGAGAGTTTGTGAGTTCCAGGCACGTTTGCGAAGCGAAGACGCTGCAAAAAGACTCCTGCTGCAGCGACTGCAGACACACGACCGCCAGCTCAACCAAGACATCCACCAGAACGACGAACATTCGTCCATTAACCAAGAACCTCGAGAGCAGCTCAGACTGCAGGACGGCCAGCTCAACCAAGCTGCGTCACCGACAGgtgtGAGGAGCTCTGGTGTTTTGACACAGAGACCTGTGGATTTTCCCAGTGCTGTGCAAGTGAGTAAAGTTCACTCACAGGAGCAACTGCAAAAAGACAAGGGAGAACAACTTGCTCTCATTACAGGGCTGCGCACACAGGTCAAGGAGCTGGAGGAGAAACTATTGGATCAGACGCAGGAGGTGGAGAGACTGCGCTCTGAGCTGgGGGCGACAGATCTGGAGAAACAGCTCGAGGTGCTGGAGAGTGAGAACCAGCGGCTCAAACAGGAGCTGAAGGCCAGTCAGACTCAGACCAGCTGCTCTACCAGCCACTGCCCACACAGCCAGGATGTGGAGGCCCTGCGAGGAGAGCTGTGTCGTAAGGACGAGGAGTGCCGCGAGCGGGAGCGGAGGCTGGCTGCGCTGGAGCAGCAGGTGCAGGAGAGGACGGGTGTAGTAGTtcagctgcagcagcagctgGAGGAGGCGGCGCAGCGCAGACACCAGATCCAGCTGCAGCTTGAGGAGGCGTCACGTCTCAGGAGCCAGAGCGAGGAGCAGCTGACCTCACGGCTTCAAGACGCCGAGGAGGCTCTGTCTCGCCAGGCTGTTTTGACACCACACGTCAAGATTGTGACCAAGACGGTTGAAGTGGAGTCTGCTCAATGTAAGCAGGCTTTGATGGAGGCTCAGGCCCGTAACCAGGCTCTTCAGGAGCAGCTGAGCGTCCAGAGGCAGCTCCTCAGAGAGCTGGAGCAGCAGCTGCACGAGTCGCAGAGAACCAGCAGTCAGCTCCGCCAGCAGCTGAGGACGGACCGCGGCCGTCTGTATGGCCTGCTCTCCAAGGCGGTGGGTGGGGGTAACAACGAGGTCACCCACAGGCTCTCCAAGatccTGGTGTATGAGGGTGAGATGGAGAGAGCTCAGGGTCAGCTGGAGGCAGAGATGCAGAGtctggaggaggagaagaaccGAGTGATCGAGGAAGCTTTCATCAGAGCCGAGAGTGAGATGAAGGCTGTCCATGAGAACCTAGCAGGTGTGCGGATGAACCTCCTGACGCTGCAGCCGGCTCTGAGAACCCTCACCTGCGATTACAACTGTCTGAAGAGACAGGTGCAGGACTTCCCTTACATGCTGGAGAAAGCCATCTCTGAGGCGAAGCAGGAGATCTGTCAGGTGATTGGCGAGGTGAGCAGCGCGAACCAAGAGCTGCTGCGCAAGTACAAGCGAGAGATGAACCTGAGGAAGAAATGCCACAATGAACTGGTGCGCCTCAAAGGAAACATCCGCGTGTTGTGCCGAGTACGTCCCATATGTGCTGGAGAAACGGATGCTGCTGACACCAAAAACatagtgacctttgaccctgacGATGATGCTGTTCTTATCTTGTCTAATAAGGGCAAGCTCATGACCTTTGAACTTGACAAAGTCTTTCCCACTCAGGCCACTCAGGAGGAGGTGTTCCAGGAAGTGCAGTCTCTGGTCACTTCCTGTATTGATGGCTTTAACGTATGCATCTTTGCCTATGGGCAGACCGGCTCTGGAAAGACCTATACCATGGAGgGTGTCCCTGAAGACCCTGGCATTAACCAGCGTGCTCTGCGGCTGCTCTTCTCTGAAGTGTCTGAGAAAAAGCCTGACTGGGACTACAAGATCACTGTCAGCATGGTGGAGATCTACAATGAGACACTTCGAAACTTGTTGGGCGACAATCCCAACGAGAAGCTGGATATAAAGATGTGTCCGGACGGCAGTGGACAGCTGTATGTGCCAGGACTCACTGAGTTCACCGTGGAGAGCGTGGAGGACATTAACAAGGTGTTTGACCTGGGTCACATGAACCGAGCGACAGCATGCACCAATCTAAACGAGCACAGCTCTCGCTCTCACGCTCTCCTTATCGTCACAGTGGCGGGTTTCAACTCATCCACGGGCCACCGCACCTCAGGTAAGCTCAATCTGGTGGATCTGGCGGGTTCTGAGCGGATCGCCAAGTCCGGTGCCGAGGGCAGCCGCCTGCGCGAGGCTCAGTGCATCAACAAATCGCTGTCTGCGCTGGGCGACGTCATCAACGCCCTGCGCTCCAGACACTCGCACGTGCCCTTCAGGAACTCCCGCCTCACGTACCTGCTGCAGGACTCGCTCAACGGAGACAGCAAGACCCTCATGATGGTGCAGGTGTCTCCTCTGGAGAGTAACGTCAGCGAGTCGGTTTGCTCTCTGAAGTTCGCTCAGCGTGTACGGACAGTTGAGATCGGGCCCTCGTCTTCATCACGCCGCCAAGCGGAGAACTCCTCAACATCCTCCTCTCCGACTCATGACAGCGTGGAGCTGGACTCTCCTCCCGTGACCCCTGTGCCGCTCCCCATCTCGAGGGCCAGCAGCGCAGGCTCAACCCTCTCCTCCAACTCTAAGACCCCCACAACCCGACGGCGGTCCCACAGTCAGCTGTCCACAgATAGACAGGTAGACAGAAGCAGCCCATTGGTTGGGGACGGTGGGCAGGACGAATGAAGTTGACGGCGTGAGAAACGCCTCAGAGGGTCCATCCTCCAAACCTCTCGACCAATCAGCTCCTTTCTCGAACGAACCAATGATAGACCTTGCTCTGCTGCAGGGGAGGAGCTTAACCGGCAAATCAAGGTTGATGCTGGGAACTCTAATGACTGAAGCGATGTTCCTCTCGATTGGAACAAGCGACGTAATTTTCAGATGCGATACGTGATTGAAACCAATCAACACTCCCGCTGACCTCTCGACAACACCTGCTGCCTCAGGACGAGAAGACCCTTCTGACATGGATAAGTATTTCTGGGCAATAACGCACTTTAGTCTAGTCTAGGCTGTCATTTGTAATGTTGATGTTACGTAAATGCGATTCGATTTCTAGATGCTTGAATgtacgtgtatgtatatattcgTGTGTCTGAgcaagattttaatttttaaccctCGATCTTGAAGAGATCTTTCTttcgcttttgtttttttgtttttctgcaagAACAAGTACAAATCTCACACCCCGTAAGCTTCGAACAAATCTGTGTTTCATAGTGGCAATAAGAAATAATGCAAACGTGCAGTagcatttcatgtttttgaatataGAAACCCGAAGGCCGTCGAAAGCCCGGACGTCTTCCTGATCAATGCATGCGTTCAGCGCTCATCCATTTTAGGACAATCATTAACAGTTTTTGTGCGGTGAAGTCAAACCATGACGGTATACAGTGTTTGCTGAACGGGACGAGGACTAGATCTGTATATAGAGATGCATTCGGTGTGACCCCACGCTGAGAACATTCATCTGGAACCGTTTCTGGGGTCTTGCTTGCTCGTATTCACATTGGTGTACGTTTGTATGCAGTTTCGTTTTTGTACAcggtttttaataaatgctccAAACCAAACTTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185872 lncRNA upstream 94121 13216514 ~ 13218281 (+) False LOC122362547
TU185840 lncRNA upstream 299502 13009874 ~ 13012900 (+) True G125855
TU185741 lncRNA upstream 670966 12641192 ~ 12641436 (+) True G125784
TU185740 lncRNA upstream 676019 12636156 ~ 12636383 (+) True G125783
TU185704 lncRNA upstream 722458 12579725 ~ 12589944 (+) True G125760
TU185885 lncRNA downstream 312 13337754 ~ 13339066 (+) True G125877
TU185887 lncRNA downstream 9236 13346678 ~ 13346937 (+) True G125879
TU185889 lncRNA downstream 13049 13350491 ~ 13351730 (+) True G125881
TU185894 lncRNA downstream 29974 13367416 ~ 13369511 (+) True G125886
TU185895 lncRNA downstream 32271 13369713 ~ 13370781 (+) True G125887
XM_043264195.1 mRNA upstream 12764 13273197 ~ 13299638 (+) True cngb1a
XM_043264059.1 mRNA upstream 90254 13216484 ~ 13222148 (+) True LOC122362547
XM_043264060.1 mRNA upstream 90254 13218394 ~ 13222148 (+) False LOC122362547
XM_043264058.1 mRNA upstream 90257 13216484 ~ 13222145 (+) False LOC122362547
XM_043264551.1 mRNA upstream 147208 13136810 ~ 13165194 (+) False large2
XM_043216713.1 mRNA downstream 25105 13362547 ~ 13366713 (+) True eif3m
XM_043216487.1 mRNA downstream 34260 13371702 ~ 13376207 (+) True prrg4
XM_043264782.1 mRNA downstream 39764 13377206 ~ 13391679 (+) True qser1
XM_043264710.1 mRNA downstream 58769 13396211 ~ 13406293 (+) False depdc7a
XM_043264708.1 mRNA downstream 58770 13396212 ~ 13406293 (+) True depdc7a
XR_006253129.1 other upstream 94056 13216657 ~ 13218346 (+) False LOC122362547
XR_006253128.1 other upstream 94065 13216484 ~ 13218337 (+) False LOC122362547
XR_006246961.1 other upstream 356457 12946841 ~ 12955945 (+) False glb1l2
XR_006246942.1 other upstream 386934 12917226 ~ 12925468 (+) False napab
TU185810 other upstream 427790 12880588 ~ 12884612 (+) True G125836
TU185911 other downstream 89655 13427097 ~ 13430765 (+) False rpl35a
TU186277 other downstream 341603 13679045 ~ 13682571 (+) True G126132
TU186336 other downstream 572122 13909564 ~ 13912800 (+) True G126175
TU186297 other downstream 602653 13940095 ~ 13941369 (+) True G126146
TU186575 other downstream 1489439 14826881 ~ 14828292 (+) True gemin7

Expression Profile