RNA id: TU191551



Basic Information


Item Value
RNA id TU191551
length 1107
RNA type TUCP
GC content 0.50
exon number 2
gene id smim12
representative False

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 1278912 ~ 1280509 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAGGTAGGAAGTTGAATGGCCTGGACGCAGAGGTTCATGCAGCCATGTGGCCGGTGATCTGGACTGCCATGCGCGCTTACGCGCCCTACGTGACCTTCCCGGTGGCCTTTGTGGTGGGAGCTGTTGGATACCACCTTGAGTGGTTCATCCGGGGAACTCCCAATGCCCCGGGAGAGGAGAGGGGCATTGCAGAGCTACGGGAGGATAGGAAATTAGAGGAACTGACCGGTCGGGACAGCACACAGGTCCTCAGCCTGAAGGACAAACTGGAATTCACACCAAAAGCAGTGCTGGAAAGAAACCGACCGGAGAAGAGCTAAGTTCTGCAAGATCGCGTGTAACGATGTGCAGCTTCTCAGACTTTGGCCTCATTTGTCACCCTCGACGGCCCCTGGGATAGGAACTTTCTTTCATCGAAAAACGTCTTTTGTGGGATCTCGTGTCCGTGTCGCTCGGTTCAGCCGCCCTAATTGCTGTAATATTTACCAGGCCGGTCGGAGCGGTTCGACTGCTGAGAGAATTTCTTACAACTTTCATTCTTTGAAACTTCTTAAAAATCCGTCTTCTGCCCTTAGGCGCGCGGACACATGACTGCATCGCACACGTCCCGACTTGGAGAGCTTTAATAAGTTTTCCCGTTCGTGCTCCCCGTCATATGCTCATGAGACCGAAGCTCAAAGAAAGACCACCTTTGTTAAGTCTTTGGACCGTACGAATAAAAGTGCGTCTATGCGAAGCGGCGCTCGAGTTGGACTAGAAAATGTTAGAACTTTGAGGAGTCCACGCACGCTCTCTCGTTGTGATCTTTTGCTAATTAGTAATAACGAACTCGGTGAATATAGTGGGGAATGGAAGCCGTGTTTAGCCTCGGTGCCCTTTTAGGTTGTGTAAGAATTCTGCGCACACTTGAAATATCGGGGCTATAAGGTTTAGCTTGTATTTCATCCCAATTATCCGTGGGTTTGAGACCTTGTTGCATGTGCGGGACAGTGAACTTGTAGTGTTGCAAAGATCATTACCCATGTAGTGCTTTCCTAAGCATTGTAATGGCTAAAATGTAAGTGATAATTGCACAGCTACCTTTTGTGCCGAAGTGTGTGGCTGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191559 lncRNA downstream 6483 1272224 ~ 1272429 (-) True G129717
TU191556 lncRNA downstream 20598 1256545 ~ 1258314 (-) True G129714
TU191502 lncRNA downstream 226851 1051508 ~ 1052061 (-) False thsd7aa
XR_006247109.1 lncRNA downstream 384014 863289 ~ 894898 (-) True LOC122324168
TU191441 lncRNA downstream 556601 719320 ~ 722311 (-) True G129635
TU191579 lncRNA upstream 12169 1292631 ~ 1293279 (-) True G129728
TU191582 lncRNA upstream 31724 1312186 ~ 1313269 (-) True G129731
TU191588 lncRNA upstream 217600 1498062 ~ 1498636 (-) True G129737
TU191592 lncRNA upstream 250458 1530920 ~ 1531330 (-) True G129741
TU191604 lncRNA upstream 303609 1584071 ~ 1585419 (-) True G129750
XM_043218161.1 mRNA downstream 30089 1116971 ~ 1248823 (-) True dlgap3
XM_043218162.1 mRNA downstream 30108 1116971 ~ 1248804 (-) False dlgap3
XM_043217896.1 mRNA downstream 166683 1094990 ~ 1112229 (-) True LOC122323802
XM_043216996.1 mRNA downstream 184009 1072151 ~ 1094903 (-) False LOC122323272
XM_043217895.1 mRNA downstream 226788 1017155 ~ 1052124 (-) True thsd7aa
XM_043218225.1 mRNA upstream 1077 1281539 ~ 1287206 (-) True pef1
XM_043217205.1 mRNA upstream 221833 1502295 ~ 1503733 (-) True LOC122323396
XM_043217467.1 mRNA upstream 340639 1621101 ~ 1626642 (-) True LOC122323557
XM_043217470.1 mRNA upstream 365106 1645568 ~ 1657024 (-) True LOC122323559
XM_043218506.1 mRNA upstream 424534 1704996 ~ 1863997 (-) False LOC122324230
XR_006246987.1 other downstream 184009 1072151 ~ 1094903 (-) False LOC122323272
TU191574 other upstream 3425 1283887 ~ 1286640 (-) False pef1
TU191589 other upstream 218226 1498688 ~ 1499406 (-) True G129738
XR_006247127.1 other upstream 1038065 2318527 ~ 2318597 (-) True LOC122324257
XR_006247128.1 other upstream 1038510 2318972 ~ 2319048 (-) True LOC122324258
XR_006247129.1 other upstream 1038774 2319236 ~ 2319373 (-) True LOC122324259

Expression Profile