RNA id: TU191825


Basic Information

Item Value
RNA id TU191825
length 219
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G129916
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 2265217 ~ 2265435 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGCATTCAGTGTTCATGTAGGTCAGAGGCTGGTTATGACACAGCTCTCAGTGAAGAGAGCTGGACTCTGCTCAGAGAGAGTTCAGTTGCAAAACCCTTTCATGAAACATTACACAATACACGTTTTGCTGCGGAGCACTACATTGCTTTGATTTAGAGGTCTAAGTAGCGGTAACAGTAAATCGATGTGGCATAATGTTTATCATTGTAAAAATCATTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191792 lncRNA upstream 123912 2139892 ~ 2141305 (+) False ppp1r8a
TU191780 lncRNA upstream 182597 2082278 ~ 2082620 (+) True G129886
TU191775 lncRNA upstream 208335 2056405 ~ 2056882 (+) True G129881
XR_006247045.1 lncRNA upstream 293425 1966740 ~ 1971792 (+) True LOC122323678
TU191728 lncRNA upstream 299529 1870158 ~ 1965688 (+) False thrb
TU191849 lncRNA downstream 77600 2343035 ~ 2343239 (+) True G129936
TU191855 lncRNA downstream 85863 2351298 ~ 2351565 (+) True G129942
TU191860 lncRNA downstream 113648 2379083 ~ 2379355 (+) True G129947
TU191894 lncRNA downstream 463030 2728465 ~ 2734183 (+) True G129974
TU191899 lncRNA downstream 488589 2754024 ~ 2785827 (+) True G129979
XM_043216947.1 mRNA upstream 83490 2153835 ~ 2181727 (+) True foxo6b
XM_043217844.1 mRNA upstream 123885 2134652 ~ 2141332 (+) True ppp1r8a
XM_043217845.1 mRNA upstream 123885 2134652 ~ 2141332 (+) False ppp1r8a
XM_043217846.1 mRNA upstream 134691 2119968 ~ 2130526 (+) False pdik1l
XM_043217847.1 mRNA upstream 134691 2120262 ~ 2130526 (+) True pdik1l
XM_043218231.1 mRNA downstream 45835 2311270 ~ 2318033 (+) True ctps1a
XM_043218444.1 mRNA downstream 56966 2322401 ~ 2327881 (+) True rab42a
XM_043218125.1 mRNA downstream 66298 2331733 ~ 2341123 (+) True gmeb1
XM_043218123.1 mRNA downstream 66298 2331733 ~ 2341123 (+) False gmeb1
XM_043218191.1 mRNA downstream 115186 2380621 ~ 2564556 (+) True ptprua
TU191722 other upstream 291833 1970692 ~ 1973384 (+) False LOC122323678
XR_006247023.1 other upstream 592876 1657298 ~ 1672341 (+) False LOC122323556
TU191508 other upstream 1158644 1072151 ~ 1106573 (+) True G129682
XR_006247126.1 other downstream 64706 2330141 ~ 2330276 (+) True LOC122324256
TU191918 other downstream 520490 2785925 ~ 2786348 (+) True G129993
TU191942 other downstream 624254 2889689 ~ 2893492 (+) False serinc2
TU191970 other downstream 705252 2970687 ~ 2978416 (+) False phactr4a
TU192043 other downstream 827632 3093067 ~ 3093714 (+) True G130077

Expression Profile