RNA id: TU191849



Basic Information


Item Value
RNA id TU191849
length 205
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G129936
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 2343035 ~ 2343239 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGTCTTTCTCTACTTAGTTGTTTCTTTGTGAAGCGTTTAGGCAGAGTCGGGTCGGACTGATGGTATTTATGAGACCGGCGCACGTGAACGCCGCAGAAAAGTTGCAATCACCGACAGGAACCTCGTGACTTTCTTCAAACCTGTTGCGGAACGAGGCTGATGAAAAGCATCGATTACTCACCTAATGCATGTCTTTTGCTTTTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191825 lncRNA upstream 77600 2265217 ~ 2265435 (+) True G129916
TU191792 lncRNA upstream 201730 2139892 ~ 2141305 (+) False ppp1r8a
TU191780 lncRNA upstream 260415 2082278 ~ 2082620 (+) True G129886
TU191775 lncRNA upstream 286153 2056405 ~ 2056882 (+) True G129881
XR_006247045.1 lncRNA upstream 371243 1966740 ~ 1971792 (+) True LOC122323678
TU191855 lncRNA downstream 8059 2351298 ~ 2351565 (+) True G129942
TU191860 lncRNA downstream 35844 2379083 ~ 2379355 (+) True G129947
TU191894 lncRNA downstream 385226 2728465 ~ 2734183 (+) True G129974
TU191899 lncRNA downstream 410785 2754024 ~ 2785827 (+) True G129979
TU191939 lncRNA downstream 542232 2885471 ~ 2887604 (+) False LOC122323290
XM_043218125.1 mRNA upstream 1912 2331733 ~ 2341123 (+) True gmeb1
XM_043218123.1 mRNA upstream 1912 2331733 ~ 2341123 (+) False gmeb1
XM_043218444.1 mRNA upstream 15154 2322401 ~ 2327881 (+) True rab42a
XM_043218231.1 mRNA upstream 25002 2311270 ~ 2318033 (+) True ctps1a
XM_043216947.1 mRNA upstream 161308 2153835 ~ 2181727 (+) True foxo6b
XM_043218191.1 mRNA downstream 37382 2380621 ~ 2564556 (+) True ptprua
XM_043218192.1 mRNA downstream 37382 2380621 ~ 2564556 (+) False ptprua
XM_043218195.1 mRNA downstream 37382 2380621 ~ 2564556 (+) False ptprua
XM_043218196.1 mRNA downstream 37382 2380621 ~ 2564556 (+) False ptprua
XM_043218193.1 mRNA downstream 37382 2380621 ~ 2564556 (+) False ptprua
XR_006247126.1 other upstream 12759 2330141 ~ 2330276 (+) True LOC122324256
TU191722 other upstream 369651 1970692 ~ 1973384 (+) False LOC122323678
XR_006247023.1 other upstream 670694 1657298 ~ 1672341 (+) False LOC122323556
TU191508 other upstream 1236462 1072151 ~ 1106573 (+) True G129682
TU191918 other downstream 442686 2785925 ~ 2786348 (+) True G129993
TU191942 other downstream 546450 2889689 ~ 2893492 (+) False serinc2
TU191970 other downstream 627448 2970687 ~ 2978416 (+) False phactr4a
TU192043 other downstream 749828 3093067 ~ 3093714 (+) True G130077
TU192216 other downstream 1416628 3759867 ~ 3760985 (+) True G130208

Expression Profile