RNA id: TU192810


Basic Information

Item Value
RNA id TU192810
length 298
RNA type TUCP
GC content 0.65
exon number 2
gene id G130613
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4977885 ~ 4983244 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TAGGTAAAGGCGTGCAGCTGGAGTGCCGCGGCGAGGGAGACGTGTGGATGCGCTGCATGAGCGACCACGCTGTCTTTGTGCAGAGCTACTACCTGGACAGGGAGGCGGGCCGAGCGCCAGGAGACGCCGTGCACAAAATATACCCAGGGGCCTACATAAAGGTCTTCGACCTCAGGCAGTGTCACAGACAGATGCAGCAGCAGGCGGCCACGGCTCaggcggcggcggcggctcaGGCCGCGGCGGTGGCCGGAAACATCCCAGGACCCGGAAGTGTCGGAGGAATCGCTCCCGCAGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU192802 lncRNA upstream 13152 4828441 ~ 4964733 (+) True LOC122323731
TU192784 lncRNA upstream 18723 4825444 ~ 4959162 (+) False G130599
TU192781 lncRNA upstream 19554 4825444 ~ 4958331 (+) False G130599
XR_006247095.1 lncRNA downstream 47781 5031025 ~ 5039776 (+) True LOC122324049
TU192840 lncRNA downstream 65150 5048394 ~ 5220081 (+) False G130622
TU192838 lncRNA downstream 117547 5100791 ~ 5220081 (+) True G130622
TU192873 lncRNA downstream 243479 5226723 ~ 5227613 (+) False LOC122324077
TU192890 lncRNA downstream 373626 5356870 ~ 5357094 (+) True G130665
XM_043218573.1 mRNA upstream 103511 4855129 ~ 4874374 (+) True LOC122324248
XM_043217806.1 mRNA upstream 145529 4828418 ~ 4832356 (+) False LOC122323731
XM_043217788.1 mRNA upstream 169351 4781346 ~ 4808534 (+) True eepd1
XM_043217817.1 mRNA upstream 204200 4738838 ~ 4773685 (+) False sept7a
XM_043218220.1 mRNA downstream 7614 4990858 ~ 5010109 (+) True LOC122324037
XM_043218237.1 mRNA downstream 31563 5014807 ~ 5025133 (+) False LOC122324057
XM_043218238.1 mRNA downstream 34316 5017560 ~ 5025133 (+) True LOC122324057
XM_043218240.1 mRNA downstream 35601 5018845 ~ 5025133 (+) False LOC122324057
XM_043218372.1 mRNA downstream 42584 5025828 ~ 5029875 (+) True pex11b
TU192832 other upstream 4538 4965451 ~ 4973347 (+) True G130619
TU192829 other upstream 9545 4965310 ~ 4968340 (+) False G130619
TU192831 other upstream 9545 4965451 ~ 4968340 (+) False G130619
TU192803 other upstream 15185 4960913 ~ 4962700 (+) True G130609
TU192801 other upstream 145679 4828441 ~ 4832206 (+) False LOC122323731
TU192857 other downstream 179342 5162586 ~ 5163399 (+) True G130637
TU192837 other downstream 193031 5176275 ~ 5179677 (+) True LOC122323259
TU192862 other downstream 240456 5223700 ~ 5314178 (+) True G130640
TU192863 other downstream 240456 5223700 ~ 5314178 (+) False G130640
XR_006247105.1 other downstream 600261 5583505 ~ 5585655 (+) False LOC122324139

Expression Profile