RNA id: TU192953



Basic Information


Item Value
RNA id TU192953
length 736
lncRNA type read_through
GC content 0.45
exon number 2
gene id G130702
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4772820 ~ 4903960 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gagagaaacaacacacacacacacacacaccggactGGCCGAGAACGCCAGCTCACTGTTCCTGAATCAGAGCAGAAAACCTCTCACCAACCCTCTATTGCATGCCGTCCATCCTCGGACAGGTCACGTGACGTTCGTCAAGGACTTAAAACAGTCAACCGGagctttaaatgacaaaataatagcaatcgaaaaaaacaaaaaaaaaaaactttcatgaATGGCTAAGGTCCGCggctaaataatttaaattacacaaatattGAAAGAGCTAAACATTTCGGGAAGGGGAAAAGAAGAAGCCATAAAAAAAGGTGGTCTTTTAAAGGCCAGAAATGCCTGAGGTAAGATTCAGCCTTTATCGAGCGCAGGAGGAAGTGACCTCGGGTCTGAAAACACGCATCAAAACCCTCCGAGGAGCTCTCCGTGTCTGTGAGGTCTGGTGGACGAGCCGGCGCTTCAGACGCGGGGCACAGATAAGCGTTTCCAGGTCACGAAAAATAAAACGACAAACGAATGAAATAAAAGGAGCGGAAAACAGGGCTTTATATAGACGTGTGGTTTTGGTCGACAGACTGACTGAGGGTCCCCCGCTGGTTTGATTGGCAACTAGGATGTGGTGGTGGTCCGAGGGCTTTAAAagatcttcttcttcttgttctttTCCAAGGTCCTTCAGGATTCAAAAGAAGACAAATAAGTAAGCATTGACAGGCACACTTtgacacttgttaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU192926 lncRNA downstream 28265 4738805 ~ 4744555 (-) True G130690
TU192692 lncRNA downstream 231229 4540269 ~ 4541591 (-) False polr2k
TU192630 lncRNA downstream 281333 4490260 ~ 4491487 (-) True G130476
TU192638 lncRNA downstream 288424 4469759 ~ 4484396 (-) True G130482
TU192654 lncRNA downstream 364426 4408194 ~ 4408394 (-) True G130494
TU192995 lncRNA upstream 2321 4906281 ~ 4989763 (-) False G130717
TU193005 lncRNA upstream 47507 4951467 ~ 4953272 (-) True G130721
TU193040 lncRNA upstream 190452 5094412 ~ 5219970 (-) False LOC122323502
TU193038 lncRNA upstream 196861 5100821 ~ 5219970 (-) False LOC122323502
XR_006246985.1 lncRNA upstream 239305 5143265 ~ 5158004 (-) True LOC122323269
XM_043217841.1 mRNA downstream 37160 4707322 ~ 4735660 (-) True LOC122323748
XM_043217842.1 mRNA downstream 37161 4707322 ~ 4735659 (-) False LOC122323748
XM_043217588.1 mRNA downstream 191899 4573448 ~ 4580921 (-) True adck5
XM_043217762.1 mRNA downstream 231191 4539979 ~ 4541629 (-) True polr2k
XM_043218357.1 mRNA downstream 234837 4529524 ~ 4537983 (-) True spag1a
XM_043217362.1 mRNA upstream 148366 5052326 ~ 5060357 (-) False LOC122323496
XM_043217361.1 mRNA upstream 152100 5056060 ~ 5060357 (-) True LOC122323496
XM_043217363.1 mRNA upstream 159205 5063165 ~ 5065170 (-) True LOC122323497
XM_043217364.1 mRNA upstream 172754 5076714 ~ 5078874 (-) True LOC122323498
XM_043217365.1 mRNA upstream 179933 5083893 ~ 5089261 (-) True LOC122323501
TU192049 other downstream 1623031 3149154 ~ 3149789 (-) True G130083
TU191990 other downstream 1861217 2908489 ~ 2911603 (-) True G130041
TU191925 other downstream 1939864 2825344 ~ 2832956 (-) True G130000
TU191907 other downstream 2021250 2740004 ~ 2751570 (-) True LOC122323398
XR_006247129.1 other downstream 2453447 2319236 ~ 2319373 (-) True LOC122324259
TU193036 other upstream 183284 5087244 ~ 5104353 (-) False LOC122323502
TU193037 other upstream 183284 5087244 ~ 5222883 (-) True LOC122323502
TU193035 other upstream 196861 5100821 ~ 5104353 (-) False LOC122323502
TU193048 other upstream 237545 5141505 ~ 5158002 (-) True G130744
TU193049 other upstream 237545 5141505 ~ 5260164 (-) False G130744

Expression Profile