RNA id: TU192962



Basic Information


Item Value
RNA id TU192962
length 794
lncRNA type read_through
GC content 0.39
exon number 2
gene id G130708
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4791850 ~ 4922621 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tgctgcCGCTTTCAATTAGTGTACATAGAAACCACTGCTATTTGAATTTGAAGTGTAAATAGTATATCTGctaaaaaatgctgctttttcaCCTAGTGTAAATAGAATAAATCGCTATTTTCACTTAAATAGCCGCTGCCTACATCATATCTCCCTCAATATGAAACTAATGATGTTGACGATTACATCCATAATAACCGCAGAGCTGTTTGTTTTGGAAAGCGATTCTCCGGGTTAGTGCTCAAACAATATGAAGCAGCAAACAGCAAATGGTTCTGTGCAATGATCAATTCTTAAACACATGAGAAGAAATGAGTGTGTGAAGTTAAGATGAGACACGCCGCCTTGGGAATCGGTCTCAGAAACACCGATCCGACCCTCGTCTGAATGTGATCTTATTGTCCTCGGCAGTTCCACCCCTCAACAGTGCTGTGGTACGGTGATCCTCCGGGAGCAATGCTAACCAACCGGTCGGAAGATGAGCTCCGTGAGCAGACGCACACCGCTCGAGAGCGGCCTGTCCTCGGGAGCCGCCAAATCTTGGCATAAAAAGAACAATATGCCCAGGGTTTGTTTCGTGCTGTATGGACTACACAACACTTCCCAAGACACTCACCCCACTTTTGttagattatttttagaaataaaagccTTTCTGAGAATTTGGTTTGCCCAggacaaatgttattttagcattattatagtatttattaattttttaattagcttttgtaataataagattttcattttaaaaaggttttcatacgtgaaaaatattttaaaataaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU192926 lncRNA downstream 47295 4738805 ~ 4744555 (-) True G130690
TU192692 lncRNA downstream 250259 4540269 ~ 4541591 (-) False polr2k
TU192630 lncRNA downstream 300363 4490260 ~ 4491487 (-) True G130476
TU192638 lncRNA downstream 307454 4469759 ~ 4484396 (-) True G130482
TU192654 lncRNA downstream 383456 4408194 ~ 4408394 (-) True G130494
TU193005 lncRNA upstream 28846 4951467 ~ 4953272 (-) True G130721
TU193040 lncRNA upstream 171791 5094412 ~ 5219970 (-) False LOC122323502
TU193038 lncRNA upstream 178200 5100821 ~ 5219970 (-) False LOC122323502
XR_006246985.1 lncRNA upstream 220644 5143265 ~ 5158004 (-) True LOC122323269
TU193042 lncRNA upstream 253849 5176470 ~ 5222159 (-) True G130738
XM_043217841.1 mRNA downstream 56190 4707322 ~ 4735660 (-) True LOC122323748
XM_043217842.1 mRNA downstream 56191 4707322 ~ 4735659 (-) False LOC122323748
XM_043217588.1 mRNA downstream 210929 4573448 ~ 4580921 (-) True adck5
XM_043217762.1 mRNA downstream 250221 4539979 ~ 4541629 (-) True polr2k
XM_043218357.1 mRNA downstream 253867 4529524 ~ 4537983 (-) True spag1a
XM_043217362.1 mRNA upstream 129705 5052326 ~ 5060357 (-) False LOC122323496
XM_043217361.1 mRNA upstream 133439 5056060 ~ 5060357 (-) True LOC122323496
XM_043217363.1 mRNA upstream 140544 5063165 ~ 5065170 (-) True LOC122323497
XM_043217364.1 mRNA upstream 154093 5076714 ~ 5078874 (-) True LOC122323498
XM_043217365.1 mRNA upstream 161272 5083893 ~ 5089261 (-) True LOC122323501
TU192049 other downstream 1642061 3149154 ~ 3149789 (-) True G130083
TU191990 other downstream 1880247 2908489 ~ 2911603 (-) True G130041
TU191925 other downstream 1958894 2825344 ~ 2832956 (-) True G130000
TU191907 other downstream 2040280 2740004 ~ 2751570 (-) True LOC122323398
XR_006247129.1 other downstream 2472477 2319236 ~ 2319373 (-) True LOC122324259
TU193036 other upstream 164623 5087244 ~ 5104353 (-) False LOC122323502
TU193037 other upstream 164623 5087244 ~ 5222883 (-) True LOC122323502
TU193035 other upstream 178200 5100821 ~ 5104353 (-) False LOC122323502
TU193048 other upstream 218884 5141505 ~ 5158002 (-) True G130744
TU193049 other upstream 218884 5141505 ~ 5260164 (-) False G130744

Expression Profile