RNA id: TU193005



Basic Information


Item Value
RNA id TU193005
length 441
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G130721
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4951467 ~ 4953272 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACCATGGCAACGCTTCGGACTCTAGACAGAAGAGATTGAGCGCTCGGAGCGGATCCTGCGAGCGGAGATTTGAGAAACGAGGCGAGCTGCCCTGCGCCGGACGCGTGCGAGATATTATAACCGCATTACCGAGTATTAGTCGCGTCGTTCGTGCGCTTCGTTCATTTCTATAAACACTGGCGAGAAGTTGAGGCTGCGCGGCACGAGCGCGATGATGCTTGAATCCATCGAAGTTACAGAACGGCTCCATTGGCCGGAGATGGAAATGTCTAAGAGTTGTGTCCTAAGCCCCACGGAGAAGCCCGTGAGCCCCAGTCAGCTGCATCTGGAGCGCATGTCCTCTGGCGTTCTGAAGGACCTGTTTAACACGCCACCAGCAGCTACAACACACTGCTGCAGAAAGAGTCAGACGATCAGGACCCCAAACGCTCCTCCTACAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU192946 lncRNA downstream 9635 4743572 ~ 4941832 (-) False G130696
TU192962 lncRNA downstream 28846 4791850 ~ 4922621 (-) True G130708
TU192953 lncRNA downstream 47507 4772820 ~ 4903960 (-) True G130702
TU192952 lncRNA downstream 47803 4772820 ~ 4903664 (-) False G130702
TU192926 lncRNA downstream 206912 4738805 ~ 4744555 (-) True G130690
TU193040 lncRNA upstream 141140 5094412 ~ 5219970 (-) False LOC122323502
TU193038 lncRNA upstream 147549 5100821 ~ 5219970 (-) False LOC122323502
XR_006246985.1 lncRNA upstream 189993 5143265 ~ 5158004 (-) True LOC122323269
TU193042 lncRNA upstream 223198 5176470 ~ 5222159 (-) True G130738
TU193055 lncRNA upstream 237164 5190436 ~ 5192653 (-) True G130750
XM_043217749.1 mRNA downstream 123552 4821737 ~ 4827915 (-) True LOC122323699
XM_043217748.1 mRNA downstream 123553 4821737 ~ 4827914 (-) False LOC122323699
XM_043217137.1 mRNA downstream 131440 4809114 ~ 4820027 (-) False LOC122323359
XM_043217138.1 mRNA downstream 131576 4809114 ~ 4819891 (-) True LOC122323359
XM_043217841.1 mRNA downstream 215807 4707322 ~ 4735660 (-) True LOC122323748
XM_043217362.1 mRNA upstream 99054 5052326 ~ 5060357 (-) False LOC122323496
XM_043217361.1 mRNA upstream 102788 5056060 ~ 5060357 (-) True LOC122323496
XM_043217363.1 mRNA upstream 109893 5063165 ~ 5065170 (-) True LOC122323497
XM_043217364.1 mRNA upstream 123442 5076714 ~ 5078874 (-) True LOC122323498
XM_043217365.1 mRNA upstream 130621 5083893 ~ 5089261 (-) True LOC122323501
TU192945 other downstream 9635 4808097 ~ 4941832 (-) True G130696
TU192049 other downstream 1801678 3149154 ~ 3149789 (-) True G130083
TU191990 other downstream 2039864 2908489 ~ 2911603 (-) True G130041
TU191925 other downstream 2118511 2825344 ~ 2832956 (-) True G130000
TU191907 other downstream 2199897 2740004 ~ 2751570 (-) True LOC122323398
TU193036 other upstream 133972 5087244 ~ 5104353 (-) False LOC122323502
TU193037 other upstream 133972 5087244 ~ 5222883 (-) True LOC122323502
TU193035 other upstream 147549 5100821 ~ 5104353 (-) False LOC122323502
TU193048 other upstream 188233 5141505 ~ 5158002 (-) True G130744
TU193049 other upstream 188233 5141505 ~ 5260164 (-) False G130744

Expression Profile