Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU193185 |
| length | 293 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G130833 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056717.1 |
| NCBI id | CM032086.1 |
| chromosome length | 20532727 |
| location | 5548507 ~ 5548799 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0060070 | canonical Wnt signaling pathway | biological_process |
| GO:0198738 | cell-cell signaling by wnt | biological_process |
| GO:1905114 | cell surface receptor signaling pathway involved in cell-cell signaling | biological_process |
| GO:0048699 | generation of neurons | biological_process |
| GO:0021514 | ventral spinal cord interneuron differentiation | biological_process |
| GO:0021515 | cell differentiation in spinal cord | biological_process |
| GO:0021517 | ventral spinal cord development | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| id | description |
|---|---|
| ko05217 | Basal cell carcinoma |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU193148 | lncRNA | upstream | 43093 | 5503266 ~ 5505414 (+) | True | G130813 |
| TU192888 | lncRNA | upstream | 142941 | 5404453 ~ 5405566 (+) | True | G130664 |
| TU192908 | lncRNA | upstream | 162390 | 5382816 ~ 5386117 (+) | True | G130676 |
| TU192909 | lncRNA | upstream | 162959 | 5385136 ~ 5385548 (+) | True | G130677 |
| TU192890 | lncRNA | upstream | 191413 | 5356870 ~ 5357094 (+) | True | G130665 |
| TU193190 | lncRNA | downstream | 16581 | 5565380 ~ 5587515 (+) | True | G130835 |
| TU193218 | lncRNA | downstream | 62189 | 5610988 ~ 5612338 (+) | True | LOC122324017 |
| XR_006247088.1 | lncRNA | downstream | 62313 | 5611112 ~ 5611964 (+) | False | LOC122324017 |
| TU193224 | lncRNA | downstream | 65465 | 5614264 ~ 5632428 (+) | True | G130855 |
| TU193228 | lncRNA | downstream | 110734 | 5659533 ~ 5670532 (+) | True | G130858 |
| XM_043218491.1 | mRNA | upstream | 15620 | 5531960 ~ 5532887 (+) | True | LOC122324215 |
| XM_043217321.1 | mRNA | upstream | 47911 | 5484922 ~ 5500596 (+) | True | eya3 |
| XM_043217323.1 | mRNA | upstream | 47911 | 5484940 ~ 5500596 (+) | False | eya3 |
| XM_043217322.1 | mRNA | upstream | 47911 | 5484940 ~ 5500596 (+) | False | eya3 |
| XM_043218181.1 | mRNA | upstream | 64839 | 5471782 ~ 5483668 (+) | True | si:ch211-195b13.1 |
| XM_043217936.1 | mRNA | downstream | 20931 | 5569730 ~ 5571271 (+) | True | LOC122323836 |
| XM_043218363.1 | mRNA | downstream | 34706 | 5583505 ~ 5585655 (+) | True | LOC122324139 |
| XM_043216990.1 | mRNA | downstream | 64269 | 5613068 ~ 5614130 (+) | True | LOC122323266 |
| XM_043218065.1 | mRNA | downstream | 167897 | 5716696 ~ 5717681 (+) | True | rpa3 |
| XM_043218150.1 | mRNA | downstream | 176569 | 5725368 ~ 5739185 (+) | True | col28a1a |
| TU192862 | other | upstream | 234329 | 5223700 ~ 5314178 (+) | True | G130640 |
| TU192863 | other | upstream | 234329 | 5223700 ~ 5314178 (+) | False | G130640 |
| TU192837 | other | upstream | 368830 | 5176275 ~ 5179677 (+) | True | LOC122323259 |
| TU192857 | other | upstream | 385108 | 5162586 ~ 5163399 (+) | True | G130637 |
| TU192810 | other | upstream | 565263 | 4977885 ~ 4983244 (+) | True | G130613 |
| XR_006247105.1 | other | downstream | 34706 | 5583505 ~ 5585655 (+) | False | LOC122324139 |
| XR_006246984.1 | other | downstream | 197002 | 5745801 ~ 5752782 (+) | True | LOC122323254 |
| TU193273 | other | downstream | 236331 | 5785130 ~ 5922973 (+) | False | LOC122323983 |
| TU193467 | other | downstream | 914284 | 6463083 ~ 6488760 (+) | True | G131047 |
| TU193457 | other | downstream | 971121 | 6519920 ~ 6526080 (+) | True | G131042 |
