Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU193304 |
| length | 623 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G130920 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056717.1 |
| NCBI id | CM032086.1 |
| chromosome length | 20532727 |
| location | 5752585 ~ 5883367 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU193252 | lncRNA | downstream | 77707 | 5674554 ~ 5674878 (-) | True | G130880 |
| TU193179 | lncRNA | downstream | 229619 | 5520939 ~ 5522966 (-) | True | G130827 |
| TU193178 | lncRNA | downstream | 229965 | 5520939 ~ 5522620 (-) | False | G130827 |
| TU193134 | lncRNA | downstream | 311720 | 5440426 ~ 5440865 (-) | True | G130804 |
| TU193130 | lncRNA | downstream | 318656 | 5433562 ~ 5433929 (-) | True | G130801 |
| TU193350 | lncRNA | upstream | 223772 | 6107139 ~ 6162535 (-) | True | G130955 |
| TU193367 | lncRNA | upstream | 269672 | 6153039 ~ 6155564 (-) | True | G130969 |
| TU193371 | lncRNA | upstream | 314758 | 6198125 ~ 6198361 (-) | True | G130973 |
| TU193376 | lncRNA | upstream | 350677 | 6234044 ~ 6236277 (-) | True | G130978 |
| TU193381 | lncRNA | upstream | 364984 | 6248351 ~ 6293266 (-) | True | G130982 |
| XM_043217226.1 | mRNA | downstream | 8008 | 5739319 ~ 5744577 (-) | True | LOC122323412 |
| XM_043217405.1 | mRNA | downstream | 36298 | 5706149 ~ 5716287 (-) | True | umad1 |
| XM_043217406.1 | mRNA | downstream | 36311 | 5706149 ~ 5716274 (-) | False | umad1 |
| XM_043217403.1 | mRNA | downstream | 47275 | 5675485 ~ 5705310 (-) | True | glcci1a |
| XM_043218143.1 | mRNA | downstream | 82214 | 5614268 ~ 5670371 (-) | True | rims3 |
| XM_043217637.1 | mRNA | upstream | 40258 | 5923625 ~ 5932827 (-) | False | asns |
| XM_043217638.1 | mRNA | upstream | 40258 | 5923625 ~ 5932020 (-) | True | asns |
| XM_043217639.1 | mRNA | upstream | 50265 | 5933632 ~ 5938584 (-) | True | bloc1s4 |
| XM_043218358.1 | mRNA | upstream | 56083 | 5939450 ~ 5970571 (-) | True | pard6gb |
| XM_043217547.1 | mRNA | upstream | 280456 | 6163823 ~ 6192690 (-) | True | dtnbp1b |
| XR_006247124.1 | other | downstream | 347367 | 5405086 ~ 5405218 (-) | False | LOC122324254 |
| XR_006247125.1 | other | downstream | 347685 | 5404769 ~ 5404900 (-) | True | LOC122324255 |
| TU193049 | other | downstream | 492421 | 5141505 ~ 5260164 (-) | False | G130744 |
| TU193082 | other | downstream | 500396 | 5245353 ~ 5252189 (-) | True | G130763 |
| TU193048 | other | downstream | 594583 | 5141505 ~ 5158002 (-) | True | G130744 |
| TU193406 | other | upstream | 478980 | 6362347 ~ 6363172 (-) | True | G131006 |
| TU193577 | other | upstream | 747822 | 6631189 ~ 6639220 (-) | False | sh3bp5lb |
| TU193649 | other | upstream | 765071 | 6648438 ~ 6649389 (-) | True | polr1h |
| XR_006247130.1 | other | upstream | 819956 | 6703323 ~ 6703389 (-) | True | LOC122324260 |
| XR_006247131.1 | other | upstream | 820504 | 6703871 ~ 6703937 (-) | True | LOC122324261 |
