RNA id: TU193656



Basic Information


Item Value
RNA id TU193656
length 744
lncRNA type inter_gene
GC content 0.42
exon number 8
gene id G131153
representative False

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6693892 ~ 6704443 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gttcttttcattttggggttgCTGCAGTTGCTCGTGTGATGGTCATTTTTacttgaactgaactgaactgggATGTTTTGGGAAACCAAATTTCAGAGAATGTGCCCAAGCTGCAGCAGTTTCCCGATTTGGTGGGAGGAACAGACGCTGCCAGGTAGCTGATGTCAACGTCTGACAACCAGTGGATTGGATGGAAGGAAGAGATGTTGCCAGCTACTGGCTGATCTCCAATAATTGACTACCAATGGGTTGGATTCCCGCTGGACGGTTAATGGCGACACTTGATAACTAGTGGGTTATCAACTAAGGGTGTGAAGCCAATACGGCCGTGGTCTCCAGCCCTTGAAGCTACATAAGGTTGAAGTGATAGCAGAGCGACTTGCCAATGATGGGTGAACTTCTTCTTTGAAAGcacagatctgtctctccAGGTTTATGCCATACCAGAAGAGTCACGGAGACCGTTGTCAAGCTTTGTAGTATTGTGTAACTTGCACCCGTTCCAGTGTCATTTGTATATCATTCCCAGTTTGAGAGAGacttttcttttgcatttaataaaaatcactaTAACGGCTGAATAAAGCTGTCGtttgttttttggaaatagcAGGTCCATCCTGTAGTTTAATGCCTTTTCTTGCTGTAGGATACGGTCATATTTCATACTTGCATGCCATATAGCTGATTTAATACTTAAGatattaattttgtaatgttcatcaaactttttaattaaatggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU193661 lncRNA downstream 719 6693892 ~ 6701605 (-) True G131153
TU193666 lncRNA downstream 719 6693892 ~ 6701605 (-) False G131153
TU193555 lncRNA downstream 262242 6438205 ~ 6440082 (-) True G131114
TU193399 lncRNA downstream 346849 6354956 ~ 6355475 (-) True G130999
TU193381 lncRNA downstream 409058 6248351 ~ 6293266 (-) True G130982
TU193673 lncRNA upstream 1796 6706239 ~ 6708065 (-) True LOC122323439
TU193682 lncRNA upstream 49971 6754414 ~ 6755435 (-) True G131165
TU193683 lncRNA upstream 55731 6760174 ~ 6760448 (-) True G131166
TU193728 lncRNA upstream 145926 6850369 ~ 6852128 (-) False srd5a1
XR_006247094.1 lncRNA upstream 179519 6883962 ~ 6885443 (-) True LOC122324041
XM_043217382.1 mRNA downstream 124 6696902 ~ 6702200 (-) True c19h6orf47
XM_043217376.1 mRNA downstream 5956 6672539 ~ 6696368 (-) True vars2
XM_043217377.1 mRNA downstream 5958 6672539 ~ 6696366 (-) False vars2
XM_043217378.1 mRNA downstream 10331 6672539 ~ 6691993 (-) False vars2
XM_043217379.1 mRNA downstream 10524 6672539 ~ 6691800 (-) False vars2
XM_043217257.1 mRNA upstream 12296 6716739 ~ 6725694 (-) True si:ch211-152p11.4
XM_043217947.1 mRNA upstream 57632 6762075 ~ 6765872 (-) True LOC122323845
XM_043218252.1 mRNA upstream 65428 6769871 ~ 6821321 (-) False adcy2b
XM_043218253.1 mRNA upstream 65428 6769871 ~ 6821320 (-) False adcy2b
XM_043218251.1 mRNA upstream 65428 6769871 ~ 6821320 (-) True adcy2b
TU193649 other downstream 52935 6648438 ~ 6649389 (-) True polr1h
TU193577 other downstream 63104 6631189 ~ 6639220 (-) False sh3bp5lb
TU193406 other downstream 339152 6362347 ~ 6363172 (-) True G131006
XR_006247124.1 other downstream 1297106 5405086 ~ 5405218 (-) False LOC122324254
XR_006247125.1 other downstream 1297424 5404769 ~ 5404900 (-) True LOC122324255
TU193894 other upstream 652178 7356621 ~ 7360111 (-) True LOC122323893
TU193918 other upstream 690737 7395180 ~ 7397946 (-) True LOC122324169
TU193992 other upstream 897690 7602133 ~ 7605143 (-) True G131373
XR_006247052.1 other upstream 1414506 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other upstream 1417069 8121512 ~ 8129258 (-) False khdrbs1b

Expression Profile