RNA id: XR_006247005.1



Basic Information


Item Value
RNA id XR_006247005.1
length 625
lncRNA type inter_gene
GC content 0.45
exon number 8
gene id LOC122323439
representative False

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6702483 ~ 6708065 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCAGCATTAGGACCCTGCTAAATATCTTGCACGCTGCGTGgttcttttcattttggggttgCTGCAGTTGCTCGTGTGATGGTCATTTTTacttgaactgaactgaactgggATGTTTTGGGAAACCAAATTTCAGAGAATGTGCCCAAGCTGCAGCAGTTTCCCGATTTGGTGGGAGGAACAGACGCTGCCAGGTAGCTGATGTCAACGTCTGACAACCAGTGGATTGGATGGAAGGAAGAGATGTTGCCAGCTACTGGCTGATCTCCAATAATTGACTACCAATGGGTTGGATTCCCGCTGGACGGTTAATGGCGACACTTGATAACTAGTGGGTTATCAACTAAGGGTGTGAAGCCAATACGGCCGTGGTCTCCAGCCCTTGAAGCTACATAAGGTTGAAGTGATAGCAGAGCGACTTGCCAATGATGGGTGAACTTCTTCTTTGAAAGcacagatctgtctctccAGGTTTATGCCATACCAGAAGAGTCACGGAGACCGTTGTCAAGCTTTGTAGTATTGTGTAACTTGCACCCGTTCCAGTGTCATTTGTATATCATTCCCAGTTTGAGAGAGacttttcttttgcatttaataaaaatcactaTAACGGCTGAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU193661 lncRNA downstream 878 6693892 ~ 6701605 (-) True G131153
TU193666 lncRNA downstream 878 6693892 ~ 6701605 (-) False G131153
TU193555 lncRNA downstream 262401 6438205 ~ 6440082 (-) True G131114
TU193399 lncRNA downstream 347008 6354956 ~ 6355475 (-) True G130999
TU193381 lncRNA downstream 409217 6248351 ~ 6293266 (-) True G130982
TU193673 lncRNA upstream 1756 6706239 ~ 6708065 (-) True LOC122323439
TU193682 lncRNA upstream 49931 6754414 ~ 6755435 (-) True G131165
TU193683 lncRNA upstream 55691 6760174 ~ 6760448 (-) True G131166
TU193728 lncRNA upstream 145886 6850369 ~ 6852128 (-) False srd5a1
XR_006247094.1 lncRNA upstream 179479 6883962 ~ 6885443 (-) True LOC122324041
XM_043217382.1 mRNA downstream 283 6696902 ~ 6702200 (-) True c19h6orf47
XM_043217377.1 mRNA downstream 6117 6672539 ~ 6696366 (-) False vars2
XM_043217257.1 mRNA upstream 12256 6716739 ~ 6725694 (-) True si:ch211-152p11.4
XM_043217947.1 mRNA upstream 57592 6762075 ~ 6765872 (-) True LOC122323845
XM_043218252.1 mRNA upstream 65388 6769871 ~ 6821321 (-) False adcy2b
XM_043218253.1 mRNA upstream 65388 6769871 ~ 6821320 (-) False adcy2b
XM_043218251.1 mRNA upstream 65388 6769871 ~ 6821320 (-) True adcy2b
TU193649 other downstream 53094 6648438 ~ 6649389 (-) True polr1h
TU193577 other downstream 63263 6631189 ~ 6639220 (-) False sh3bp5lb
TU193406 other downstream 339311 6362347 ~ 6363172 (-) True G131006
XR_006247124.1 other downstream 1297265 5405086 ~ 5405218 (-) False LOC122324254
XR_006247125.1 other downstream 1297583 5404769 ~ 5404900 (-) True LOC122324255
TU193894 other upstream 652138 7356621 ~ 7360111 (-) True LOC122323893
TU193918 other upstream 690697 7395180 ~ 7397946 (-) True LOC122324169
TU193992 other upstream 897650 7602133 ~ 7605143 (-) True G131373
XR_006247052.1 other upstream 1414466 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other upstream 1417029 8121512 ~ 8129258 (-) False khdrbs1b

Expression Profile