RNA id: TU194202



Basic Information


Item Value
RNA id TU194202
length 661
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G131495
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8224819 ~ 8272803 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcaaCTCATTCAATCAGTGCAGGTCAAAGCTTCGTTATCCACAAGACTAACCTTGTTTAACCTAACGAGAAAAACATACTGTGCTTCATTTGATGCAGAAAGTGAAATAACCTTCAGTGAGAAGAATAGAGAGCAGCTCGAGTCAATGACAAAACACCATGTTGAATGTAGTAAATGACAAGTTTATTTCTTgcacaaaatgtacaaaataacaAGCGAATGGACAGCCCTTCCCCCCCACCCTCCTCCCTGCCCTGTTTGAACTCCCCGCTGATATGAAGTTGAAGTTCTGGAACAAATGTCTACGGCAAGTCTGATGGTCCAAGCCAAAACGCATGGTTTTCTTAGAGACAACACATACCCAATTCAGATTCACcgaacaattaaaaatgaataaaaacaccgTATTTACAGTCTTGTCTGAACTTTTACAGCATGCCATCTATATATTCATACAGAGCTTTTGTTTCGCAACAGAACTCCATATAGAAAACGTATTAGGAGATCAAATCAAGTTCGACTAATGGCGAGAGACACCCAAAATACAGCACTGCGTTTTTTCGCGGTAATCTTTGATTCATTCTTTTGTTCTTCAAcccacatctttttttttttttttgtttgtacgtttagttttttttttttttcttttttttttttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194151 lncRNA downstream 47979 8175383 ~ 8176840 (-) True G131464
XR_006246989.1 lncRNA downstream 80624 8142931 ~ 8144195 (-) True LOC122323284
XR_006247118.1 lncRNA downstream 140923 8078100 ~ 8083896 (-) True LOC122324233
XR_006247114.1 lncRNA downstream 177940 8046276 ~ 8046879 (-) True LOC122324217
XR_006247019.1 lncRNA downstream 227562 7996087 ~ 7997257 (-) True LOC122323519
TU194221 lncRNA upstream 7191 8279994 ~ 8280260 (-) True G131506
TU194222 lncRNA upstream 9798 8282601 ~ 8282824 (-) True G131507
TU194223 lncRNA upstream 10295 8283098 ~ 8283441 (-) True G131508
TU194226 lncRNA upstream 80730 8353533 ~ 8355117 (-) True G131511
TU194405 lncRNA upstream 268421 8541224 ~ 8555592 (-) False G131654
XM_043218467.1 mRNA downstream 8836 8197711 ~ 8215983 (-) True hpcal4
XM_043217579.1 mRNA downstream 29000 8182020 ~ 8195819 (-) False bag6l
XM_043217582.1 mRNA downstream 29038 8182020 ~ 8195781 (-) False bag6l
XM_043217583.1 mRNA downstream 29039 8182020 ~ 8195780 (-) False bag6l
XM_043217581.1 mRNA downstream 29039 8182020 ~ 8195780 (-) False bag6l
XM_043218008.1 mRNA upstream 14342 8287145 ~ 8320901 (-) False trit1
XM_043218007.1 mRNA upstream 14347 8287150 ~ 8320901 (-) False trit1
XM_043218006.1 mRNA upstream 14349 8287152 ~ 8320901 (-) True trit1
XM_043218206.1 mRNA upstream 49846 8322649 ~ 8326971 (-) True myclb
XM_043217432.1 mRNA upstream 103405 8376208 ~ 8412833 (-) False kiaa1522
XR_006247052.1 other downstream 95549 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other downstream 95561 8121512 ~ 8129258 (-) False khdrbs1b
TU193992 other downstream 619676 7602133 ~ 7605143 (-) True G131373
TU193918 other downstream 826873 7395180 ~ 7397946 (-) True LOC122324169
TU193894 other downstream 864708 7356621 ~ 7360111 (-) True LOC122323893
TU194205 other upstream 14491 8287294 ~ 8320885 (-) False trit1
XR_006247071.1 other upstream 16785 8289588 ~ 8320901 (-) False trit1
XR_006247069.1 other upstream 454456 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247085.1 other upstream 478566 8751369 ~ 8757673 (-) False hey1
TU194713 other upstream 1035917 9308720 ~ 9309352 (-) True G131861

Expression Profile