RNA id: TU194216



Basic Information


Item Value
RNA id TU194216
length 347
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G131501
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8248821 ~ 8249227 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGGCTCGGCGTGTTTCGGGGAGGTAACAGCAGTCCAGCTCTTTCCGCAGGCAAAAAGGAAGAAGAGAAAGGATGGagggaataaaacaaaacagaataaaaaggGGGAAAAGAGCAGGGCCAGAAACAACACTCCTTTATCCAAGGGAGCTGAGACTGTGGGTTTCCCTAAACGCACGGCTAGTGTCTGCTTAAACCACAAGCTCACGCTGAGTGtgtgcgtctctctctctctctctctctctctctctctcgctctccctcgctctctcaCATTCAGGCACCAAATggtctctctcactgtctctcctctctctctctctctctctctctctctctcacaaagAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194151 lncRNA downstream 71981 8175383 ~ 8176840 (-) True G131464
XR_006246989.1 lncRNA downstream 104626 8142931 ~ 8144195 (-) True LOC122323284
XR_006247118.1 lncRNA downstream 164925 8078100 ~ 8083896 (-) True LOC122324233
XR_006247114.1 lncRNA downstream 201942 8046276 ~ 8046879 (-) True LOC122324217
TU194130 lncRNA downstream 252427 7996092 ~ 7996394 (-) False LOC122323519
TU194221 lncRNA upstream 30767 8279994 ~ 8280260 (-) True G131506
TU194222 lncRNA upstream 33374 8282601 ~ 8282824 (-) True G131507
TU194223 lncRNA upstream 33871 8283098 ~ 8283441 (-) True G131508
TU194226 lncRNA upstream 104306 8353533 ~ 8355117 (-) True G131511
TU194405 lncRNA upstream 291997 8541224 ~ 8555592 (-) False G131654
XM_043218467.1 mRNA downstream 32838 8197711 ~ 8215983 (-) True hpcal4
XM_043217582.1 mRNA downstream 53040 8182020 ~ 8195781 (-) False bag6l
XM_043218008.1 mRNA upstream 37918 8287145 ~ 8320901 (-) False trit1
XM_043218007.1 mRNA upstream 37923 8287150 ~ 8320901 (-) False trit1
XM_043218006.1 mRNA upstream 37925 8287152 ~ 8320901 (-) True trit1
XM_043218206.1 mRNA upstream 73422 8322649 ~ 8326971 (-) True myclb
XM_043217432.1 mRNA upstream 126981 8376208 ~ 8412833 (-) False kiaa1522
XR_006247052.1 other downstream 119551 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other downstream 119563 8121512 ~ 8129258 (-) False khdrbs1b
TU193992 other downstream 643678 7602133 ~ 7605143 (-) True G131373
TU193918 other downstream 850875 7395180 ~ 7397946 (-) True LOC122324169
TU193894 other downstream 888710 7356621 ~ 7360111 (-) True LOC122323893
TU194205 other upstream 38067 8287294 ~ 8320885 (-) False trit1
XR_006247071.1 other upstream 40361 8289588 ~ 8320901 (-) False trit1
XR_006247069.1 other upstream 478032 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247085.1 other upstream 502142 8751369 ~ 8757673 (-) False hey1
TU194713 other upstream 1059493 9308720 ~ 9309352 (-) True G131861

Expression Profile