RNA id: TU194221



Basic Information


Item Value
RNA id TU194221
length 267
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G131506
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8279994 ~ 8280260 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGCTGATCTGATGTGAGAGGCCTGCAGGGAGACATCTGAGGTTCTGCTGTCTGCtttatgtgtgcgtgtttgtccTTGTGTGAATGCTGCCGCTATTACGAGGAAACCGAGGGCAAAGAGTGCAGTTTAGACGCATTTACTAAACGCCTTTCTGTGTGAGCTTAATTACCTTGTGTTtgcacacttaaaaaaatgtctcgGTGGGGAACAGTATGAACCCAAACAGTTTTTGGAAGCcgatttgcatattaatgtgctGTAAGAGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194202 lncRNA downstream 7191 8224819 ~ 8272803 (-) True G131495
TU194216 lncRNA downstream 30767 8248821 ~ 8249227 (-) True G131501
TU194151 lncRNA downstream 103154 8175383 ~ 8176840 (-) True G131464
XR_006246989.1 lncRNA downstream 135799 8142931 ~ 8144195 (-) True LOC122323284
XR_006247118.1 lncRNA downstream 196098 8078100 ~ 8083896 (-) True LOC122324233
TU194222 lncRNA upstream 2341 8282601 ~ 8282824 (-) True G131507
TU194223 lncRNA upstream 2838 8283098 ~ 8283441 (-) True G131508
TU194226 lncRNA upstream 73273 8353533 ~ 8355117 (-) True G131511
TU194405 lncRNA upstream 260964 8541224 ~ 8555592 (-) False G131654
TU194404 lncRNA upstream 271701 8551961 ~ 8555592 (-) True G131654
XM_043218467.1 mRNA downstream 64011 8197711 ~ 8215983 (-) True hpcal4
XM_043217582.1 mRNA downstream 84213 8182020 ~ 8195781 (-) False bag6l
XM_043218008.1 mRNA upstream 6885 8287145 ~ 8320901 (-) False trit1
XM_043218007.1 mRNA upstream 6890 8287150 ~ 8320901 (-) False trit1
XM_043218006.1 mRNA upstream 6892 8287152 ~ 8320901 (-) True trit1
XM_043218206.1 mRNA upstream 42389 8322649 ~ 8326971 (-) True myclb
XM_043217432.1 mRNA upstream 95948 8376208 ~ 8412833 (-) False kiaa1522
XR_006247052.1 other downstream 150724 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other downstream 150736 8121512 ~ 8129258 (-) False khdrbs1b
TU193992 other downstream 674851 7602133 ~ 7605143 (-) True G131373
TU193918 other downstream 882048 7395180 ~ 7397946 (-) True LOC122324169
TU193894 other downstream 919883 7356621 ~ 7360111 (-) True LOC122323893
TU194205 other upstream 7034 8287294 ~ 8320885 (-) False trit1
XR_006247071.1 other upstream 9328 8289588 ~ 8320901 (-) False trit1
XR_006247069.1 other upstream 446999 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247085.1 other upstream 471109 8751369 ~ 8757673 (-) False hey1
TU194713 other upstream 1028460 9308720 ~ 9309352 (-) True G131861

Expression Profile