RNA id: TU194223



Basic Information


Item Value
RNA id TU194223
length 344
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G131508
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8283098 ~ 8283441 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTCGATCCATAGGTGTCCTGCCGCTTAACAATACATTTACGTCTGTAACGCACTCTACGATTCCCTAAACGCTCTATGGATCCTGTTTTCCCAACCTGTGGTATCTTCATCGGAAAGCCTCGGGGGTATTGTTATCCGAGCTTGAATTCCACACATCTCTCAGCGTGAATGTCATTCAAAATAAGCAGAAAGACTCAGTTATGAAGCTTGTAGCTCATTCCTGTGGTGAGGGAAGGACCTTGCCTGGTAATGTCTCAATAACAGTGGATTGGTCACACTGGTGGGGCCTAACACGGCCCGTTCGATAAGAAGCCAGCAGTTTGCAATAACAGCCTTTACCAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194222 lncRNA downstream 274 8282601 ~ 8282824 (-) True G131507
TU194221 lncRNA downstream 2838 8279994 ~ 8280260 (-) True G131506
TU194202 lncRNA downstream 10295 8224819 ~ 8272803 (-) True G131495
TU194216 lncRNA downstream 33871 8248821 ~ 8249227 (-) True G131501
TU194151 lncRNA downstream 106258 8175383 ~ 8176840 (-) True G131464
TU194226 lncRNA upstream 70092 8353533 ~ 8355117 (-) True G131511
TU194405 lncRNA upstream 257783 8541224 ~ 8555592 (-) False G131654
TU194404 lncRNA upstream 268520 8551961 ~ 8555592 (-) True G131654
TU194433 lncRNA upstream 355987 8639428 ~ 8639657 (-) True G131675
TU194432 lncRNA upstream 374718 8658159 ~ 8659014 (-) False tdp2b
XM_043218467.1 mRNA downstream 67115 8197711 ~ 8215983 (-) True hpcal4
XM_043217582.1 mRNA downstream 87317 8182020 ~ 8195781 (-) False bag6l
XM_043218008.1 mRNA upstream 3704 8287145 ~ 8320901 (-) False trit1
XM_043218007.1 mRNA upstream 3709 8287150 ~ 8320901 (-) False trit1
XM_043218006.1 mRNA upstream 3711 8287152 ~ 8320901 (-) True trit1
XM_043218206.1 mRNA upstream 39208 8322649 ~ 8326971 (-) True myclb
XM_043217432.1 mRNA upstream 92767 8376208 ~ 8412833 (-) False kiaa1522
XR_006247052.1 other downstream 153828 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other downstream 153840 8121512 ~ 8129258 (-) False khdrbs1b
TU193992 other downstream 677955 7602133 ~ 7605143 (-) True G131373
TU193918 other downstream 885152 7395180 ~ 7397946 (-) True LOC122324169
TU193894 other downstream 922987 7356621 ~ 7360111 (-) True LOC122323893
TU194205 other upstream 3853 8287294 ~ 8320885 (-) False trit1
XR_006247071.1 other upstream 6147 8289588 ~ 8320901 (-) False trit1
XR_006247069.1 other upstream 443818 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247085.1 other upstream 467928 8751369 ~ 8757673 (-) False hey1
TU194713 other upstream 1025279 9308720 ~ 9309352 (-) True G131861

Expression Profile