RNA id: TU194226


Basic Information

Item Value
RNA id TU194226
length 1545
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G131511
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8353533 ~ 8355117 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTCAATTGTTCTTAATTGTTTCTTGCATTTTCAGcgtatgcatacatttttcgcAGGGTGACGGGTGTCCAGTGGGTGGCAGAAACTAAAACGGAAAAGAGAAGAAGCGTTAGCAATAGTTCACGAGATGTTTGATGAGACAATCATCTCGTGATTCATGTCGTATCGTGTCGTGTTGCACAGAGCTTTCCACAGATCTGTGAACTGCTggacaaataaacaaaagaagcCAAAACAAGTCACTCTTGTTGCCTTCAAATGTGCTACGCTACGTTAAAGGACAGGCGGGCAAAGCGAGGGAGGCTAGCAATAGCAAGCTAGCTTTGAAAGCATAAGATCCCACCCTTTCTGCAAATCACTCTCCAAAGCCACGCCTCTTCATACATATACATCTTCCAACCTACTGTAACCCTCGGACCGTTCACTAACGTTAACAAATGGAATTGTGAAAAAGTGCAACAATTTGTTAATAttccctttaaaatgtaatggagGCGTGTCGGTTTGCCATTTGGCTGAAAGATACAGTCCTGACTCTTATTTACTTGTCTgggacaaaatgacaaaattttcagtCTGTCCAGAGATCATTTCGCTCTTGTTTGCACAACCACATGGAACGAATGCCAACATGGCACGGATTAGTTATTGGTATTTCACATATGGAGCCTTGAAGTTTTACTGCTCTCCTGCACCTGATTACATGGGGACCCTATTTCTTTCACATGGACGGCGTGAGCAGAATCTCTGGCCTCGACTCGCTCCTTCTCCTTCACTTTCTGTTCCAGCATCGAGCCACAATGGCCTTTTGTAGCCTACTGTTGTAATCATGTCGAACGTTCGAGGAGTCGGAGGAGCAGTGACCTTGCTGTGACCATTATCCCACGGTTTTTTTGTTAGGGGGGGTCATTCATGAACAAACACTCTCtagctttctttgttttaatcGGCTCACACGAGTGTGTTGTCAAACGCATGTAAGATGCGGGTGTGTAATGGCGCTGAAATCCTGAGCGCTGTGCTGCTCTATGCATAGCCACAGGTGTTATGGAAAGTCACGAGCGAGTGgggtttatgtgtgtgtgtgtgtagagtatGTGAGAATTGTTCCCATTACTGCAACAGCTCTGAAGCACAGGCACCTTCTGTACCCTTGTCAGTTCTGTTTATCTGGTGCACAGCGTATGAATGTaggctatttttaattaaaacggGATGTGATATACCGGTCAAAATTCTGGACGCACCTGACTGTTCGACCTTTTAAACTGAAGGCTTGCTACCGCTTCACAGATTCTGCATTCGTTTATGTACagaatatatgtgtactgtatatacttatatataaagatatatagatatagatatatgcACCGTACACATATGTGAGCAAAAACATGCGATTTAaaagtttgacagcactaatatgcatttatttatttgagtttgGTAGTGACTGGAGTGAAAGGCTTAAAGGGGCAGTTcaaccagaaatgaaaatgtccGCTACGATTTACTGACCATCAAACAATAGATAGACatggc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU194223 lncRNA downstream 70092 8283098 ~ 8283441 (-) True G131508
TU194222 lncRNA downstream 70709 8282601 ~ 8282824 (-) True G131507
TU194221 lncRNA downstream 73273 8279994 ~ 8280260 (-) True G131506
TU194202 lncRNA downstream 80730 8224819 ~ 8272803 (-) True G131495
TU194216 lncRNA downstream 104306 8248821 ~ 8249227 (-) True G131501
TU194405 lncRNA upstream 186107 8541224 ~ 8555592 (-) False G131654
TU194404 lncRNA upstream 196844 8551961 ~ 8555592 (-) True G131654
TU194433 lncRNA upstream 284311 8639428 ~ 8639657 (-) True G131675
TU194432 lncRNA upstream 303042 8658159 ~ 8659014 (-) False tdp2b
TU194440 lncRNA upstream 369389 8724506 ~ 8775727 (-) False hey1
XM_043218206.1 mRNA downstream 26562 8322649 ~ 8326971 (-) True myclb
XM_043218008.1 mRNA downstream 32632 8287145 ~ 8320901 (-) False trit1
XM_043218007.1 mRNA downstream 32632 8287150 ~ 8320901 (-) False trit1
XM_043218006.1 mRNA downstream 32632 8287152 ~ 8320901 (-) True trit1
XM_043218467.1 mRNA downstream 137550 8197711 ~ 8215983 (-) True hpcal4
XM_043217432.1 mRNA upstream 21091 8376208 ~ 8412833 (-) False kiaa1522
XM_043217431.1 mRNA upstream 21091 8376208 ~ 8412832 (-) True kiaa1522
XM_043217430.1 mRNA upstream 21091 8376208 ~ 8412831 (-) False kiaa1522
XM_043217434.1 mRNA upstream 21091 8376208 ~ 8399584 (-) False kiaa1522
XM_043217435.1 mRNA upstream 21091 8376208 ~ 8381171 (-) False kiaa1522
XR_006247071.1 other downstream 32632 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 32648 8287294 ~ 8320885 (-) False trit1
XR_006247052.1 other downstream 224263 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other downstream 224275 8121512 ~ 8129258 (-) False khdrbs1b
TU193992 other downstream 748390 7602133 ~ 7605143 (-) True G131373
XR_006247069.1 other upstream 372142 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247085.1 other upstream 396252 8751369 ~ 8757673 (-) False hey1
TU194713 other upstream 953603 9308720 ~ 9309352 (-) True G131861
XR_006246990.1 other upstream 1304778 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 1952841 10307958 ~ 10311928 (-) False elp2

Expression Profile