RNA id: TU194433



Basic Information


Item Value
RNA id TU194433
length 230
lncRNA type inter_gene
GC content 0.19
exon number 1
gene id G131675
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8639428 ~ 8639657 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTTATGGCTACTTTCATTTGAAATTGTCAccttataaaataataatatattaatatatatatttagtatttttttattgtacaatttgttttttttaattcacaaaagaatttaagtcatataaaaaatgtattgtaaaaatctaaataaatatgtaagtaaaaatgaatacaaaatgtacagtttCAGATATTATTATCATGTAAATCAAACATATGTAGGGTCAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194405 lncRNA downstream 83836 8541224 ~ 8555592 (-) False G131654
TU194404 lncRNA downstream 83836 8551961 ~ 8555592 (-) True G131654
TU194226 lncRNA downstream 284311 8353533 ~ 8355117 (-) True G131511
TU194223 lncRNA downstream 355987 8283098 ~ 8283441 (-) True G131508
TU194222 lncRNA downstream 356604 8282601 ~ 8282824 (-) True G131507
TU194432 lncRNA upstream 18502 8658159 ~ 8659014 (-) False tdp2b
TU194440 lncRNA upstream 84849 8724506 ~ 8775727 (-) False hey1
TU194441 lncRNA upstream 84849 8724506 ~ 8786729 (-) False hey1
TU194439 lncRNA upstream 109368 8749025 ~ 8775727 (-) True hey1
TU194471 lncRNA upstream 280383 8920040 ~ 8920695 (-) True G131697
XM_043217454.1 mRNA downstream 11436 8600106 ~ 8627992 (-) True necab1
XM_043217458.1 mRNA downstream 58081 8577266 ~ 8581347 (-) True tmem106bb
XM_043218572.1 mRNA downstream 70096 8561377 ~ 8569332 (-) True scin
XM_043218142.1 mRNA downstream 79940 8556900 ~ 8559488 (-) True arl4ab
XM_043218510.1 mRNA downstream 189684 8436291 ~ 8449744 (-) False bzw2
XM_043217952.1 mRNA upstream 14841 8654498 ~ 8659486 (-) False tdp2b
XM_043217951.1 mRNA upstream 14841 8654498 ~ 8659486 (-) True tdp2b
XM_043217950.1 mRNA upstream 14841 8654498 ~ 8657330 (-) False tdp2b
XM_043217955.1 mRNA upstream 20766 8660423 ~ 8664940 (-) True c19h6orf62
XM_043217954.1 mRNA upstream 28405 8668062 ~ 8671099 (-) True LOC122323849
XR_006247071.1 other downstream 318527 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 318543 8287294 ~ 8320885 (-) False trit1
XR_006247052.1 other downstream 510158 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other downstream 510170 8121512 ~ 8129258 (-) False khdrbs1b
TU193992 other downstream 1034285 7602133 ~ 7605143 (-) True G131373
XR_006247069.1 other upstream 87602 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247085.1 other upstream 111712 8751369 ~ 8757673 (-) False hey1
TU194713 other upstream 669063 9308720 ~ 9309352 (-) True G131861
XR_006246990.1 other upstream 1020238 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 1668301 10307958 ~ 10311928 (-) False elp2

Expression Profile