RNA id: TU194471



Basic Information


Item Value
RNA id TU194471
length 534
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G131697
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8920040 ~ 8920695 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gttttacagaaataaagaagTGTCCTTACAGCTACTAATTTCCCATCGGTCACCTCCCTTTCTATCGTCGACTCTTTTCCATCCCAGGTCTGTTTCTGCACAAGCTTTCCGCTCTCGAGAGTCACAACAGtctgcagagaaagagaaagaagagtcCGTTAAGTTCTCACGACAAACGCCGCGGCAGACATCCCTCTCATCCCGCGACAAACCGTGGTCTTTCGATCATCAGCGGTGACCTCCTCGAAGGACTCGTTGAGTTTAAATTTGATCTCGGTGGTCTTGAAGGTGCTCTGGGACTTCATGCATATGAGCCCCTGGTCGTCCACACACACGACCAGGTTGGGCTTGGTCCTGTTTCCCACCTGACGAGTAGCGAAACCCACACTAGAGCCTTCATGTACTCGTCAAAGTTTTCGCTGGTGGTCATCTTCCACGTTCCCACGAATTTGTCGACCATTTTCCCGGATGATGGTGCTGGTGATGATGATGTTCCCTGTCACTCAAGCGGCAGCTCAAAGCTCAGATTTattc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194441 lncRNA downstream 133311 8724506 ~ 8786729 (-) False hey1
TU194440 lncRNA downstream 144313 8724506 ~ 8775727 (-) False hey1
TU194439 lncRNA downstream 144313 8749025 ~ 8775727 (-) True hey1
TU194432 lncRNA downstream 261026 8658159 ~ 8659014 (-) False tdp2b
TU194433 lncRNA downstream 280383 8639428 ~ 8639657 (-) True G131675
TU194658 lncRNA upstream 119253 9039948 ~ 9048451 (-) True G131820
TU194665 lncRNA upstream 160155 9080850 ~ 9081105 (-) True G131827
TU194681 lncRNA upstream 221158 9141853 ~ 9217661 (-) True G131838
TU194699 lncRNA upstream 339639 9260334 ~ 9268308 (-) False G131852
TU194700 lncRNA upstream 339639 9260334 ~ 9269148 (-) True G131852
XM_043217656.1 mRNA downstream 4594 8873112 ~ 8915446 (-) True pag1
XM_043218428.1 mRNA downstream 49300 8823758 ~ 8870740 (-) True znf704
XM_043218427.1 mRNA downstream 49300 8823758 ~ 8870740 (-) False znf704
XM_043218429.1 mRNA downstream 49301 8831945 ~ 8870739 (-) False znf704
XM_043218138.1 mRNA downstream 114562 8788213 ~ 8805478 (-) True zbtb10
XM_043218394.1 mRNA upstream 129091 9049786 ~ 9055795 (-) True gmpr
XM_043218395.1 mRNA upstream 129091 9049786 ~ 9055055 (-) False gmpr
XM_043217593.1 mRNA upstream 143063 9063758 ~ 9070995 (-) False LOC122323620
XM_043217592.1 mRNA upstream 143063 9063758 ~ 9067428 (-) True LOC122323620
XM_043217594.1 mRNA upstream 147657 9068352 ~ 9070908 (-) True LOC122323621
XR_006247085.1 other downstream 162367 8751369 ~ 8757673 (-) False hey1
XR_006247069.1 other downstream 181254 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247071.1 other downstream 599139 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 599155 8287294 ~ 8320885 (-) False trit1
XR_006247052.1 other downstream 790770 8118949 ~ 8129270 (-) True khdrbs1b
TU194713 other upstream 388025 9308720 ~ 9309352 (-) True G131861
XR_006246990.1 other upstream 739200 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 1387263 10307958 ~ 10311928 (-) False elp2
TU195129 other upstream 1387263 10307958 ~ 10310675 (-) False elp2
TU195233 other upstream 2249575 11170270 ~ 11170913 (-) True G132219

Expression Profile