RNA id: TU194701



Basic Information


Item Value
RNA id TU194701
length 809
lncRNA type intronic
GC content 0.43
exon number 2
gene id G131852
representative False

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 9260334 ~ 9269148 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGGGCACCGGCTACTCCATAATCAAATAGATGCCCTCAAGCAGAaccactttaaacaaaacaaaaacaaacaataataaccagTAACACAAATCACAATCACAGGGATCAGTAgtagatagcaggtagcaggTAGCAGATAGCAGGTAGCAGGTAGCGGGAAGCAGGTAGCGGGTAATAGATCTCCGTATCAACTAAGACTTCCGAGTAACCGAAAGTTCACGGCGCGACAGGAAAAAAACGTCAGGAACGGCGCATTTAATCGCCCAGGACGAAAGGGAGAATCCTACAAAAAAGATATGGGCAATTAACACCATTACCGCTTGCAAATCACACACTAATATTCCCCTTTAACCACCACCTAATAGAGACTTACCAAACCGGAAAAAGTATGCTCGCACGCATTCACAAATTGGGATTCGGCATCCTCAGTAATACCAATAACAAGCTAGGGTACAGGAAACTGCCTATTATTCAAACTGCGCACTCCGTCCATACCAACCCATTTTCTAGCAGTATTAAGCGCTTacctgaataaacagcagtcattaaactcatggccatcgacagaaaacaaaggaaaagacaggctaaaatgaaataacaaacgATTAGTccacaacattataaaagagACAAACGAAGAGCTAACTGCTAACACATACCTAAAACACAAGTCAAcataacaaaaaccaaaaaggcGGGGCCGGAGGTGACGCATGACCCAACAAAGCCAACCTGCTCTAAAATAGGTCACacttactgctgattggctgttacAAATGTCAGTCACCATCACTTATCCAATAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194681 lncRNA downstream 42673 9141853 ~ 9217661 (-) True G131838
TU194665 lncRNA downstream 179229 9080850 ~ 9081105 (-) True G131827
TU194658 lncRNA downstream 211883 9039948 ~ 9048451 (-) True G131820
TU194471 lncRNA downstream 339639 8920040 ~ 8920695 (-) True G131697
TU194439 lncRNA downstream 484607 8749025 ~ 8775727 (-) True hey1
TU194747 lncRNA upstream 224105 9492413 ~ 9494654 (-) True G131882
XR_006247031.1 lncRNA upstream 285235 9553543 ~ 9555368 (-) True LOC122323628
TU194766 lncRNA upstream 300762 9569070 ~ 9571386 (-) True G131896
TU194771 lncRNA upstream 323018 9591326 ~ 9591856 (-) True G131899
TU194777 lncRNA upstream 334813 9603121 ~ 9644847 (-) True G131903
XM_043217184.1 mRNA downstream 1314 9254564 ~ 9259020 (-) True LOC122323379
XM_043217186.1 mRNA downstream 30560 9225263 ~ 9229774 (-) True LOC122323382
XM_043217966.1 mRNA downstream 36512 9220651 ~ 9223822 (-) True LOC122323857
XM_043217175.1 mRNA downstream 151331 9098865 ~ 9109003 (-) False zgc:91944
XM_043217174.1 mRNA downstream 151333 9098865 ~ 9109001 (-) True zgc:91944
XM_043217758.1 mRNA upstream 190005 9458313 ~ 9469633 (-) True nt5c1aa
XM_043216997.1 mRNA upstream 211502 9479810 ~ 9484192 (-) True si:dkey-284p5.3
XM_043217021.1 mRNA upstream 216644 9484952 ~ 9491361 (-) True LOC122323292
XM_043217734.1 mRNA upstream 227314 9495622 ~ 9505038 (-) True laptm4b
XM_043217939.1 mRNA upstream 239181 9507489 ~ 9515018 (-) False mtdha
XR_006247085.1 other downstream 502661 8751369 ~ 8757673 (-) False hey1
XR_006247069.1 other downstream 521548 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247071.1 other downstream 939433 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 939449 8287294 ~ 8320885 (-) False trit1
XR_006247051.1 other downstream 1131076 8121512 ~ 8129258 (-) False khdrbs1b
TU194713 other upstream 40412 9308720 ~ 9309352 (-) True G131861
XR_006246990.1 other upstream 391587 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 1039650 10307958 ~ 10311928 (-) False elp2
TU195129 other upstream 1039650 10307958 ~ 10310675 (-) False elp2
TU195233 other upstream 1901962 11170270 ~ 11170913 (-) True G132219

Expression Profile