RNA id: TU194771



Basic Information


Item Value
RNA id TU194771
length 319
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G131899
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 9591326 ~ 9591856 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCTGATGTCATCCTCGGTGATATATCCGGTCTGTACCACCCACCAGGGCTCTACCGTGATCTCCACAGGTTTTGCTGGCAGGAGATCCCGAGCCGATTTCCTCCGGAAGAATTTCTTTGGAAGATCTGCACTGGTTCATTAGGTCAATGTACTGGTTCCTGCCAATCCCCAGCAGCCTCAGACCTGAGAAGGTCAACAGTTAGATCAATAATTACACTAATGGACACTTAACtactaaacattttatgtacCTAATCTGCAACCTATGAtactgtttaatgtttaaacaaaatcaattttgACTGTTGCAAagtcaaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194766 lncRNA downstream 19940 9569070 ~ 9571386 (-) True G131896
XR_006247031.1 lncRNA downstream 35958 9553543 ~ 9555368 (-) True LOC122323628
TU194747 lncRNA downstream 96672 9492413 ~ 9494654 (-) True G131882
TU194700 lncRNA downstream 322178 9260334 ~ 9269148 (-) True G131852
TU194699 lncRNA downstream 323018 9260334 ~ 9268308 (-) False G131852
TU194777 lncRNA upstream 11265 9603121 ~ 9644847 (-) True G131903
TU194794 lncRNA upstream 55693 9647549 ~ 9648024 (-) True G131910
XR_006247020.1 lncRNA upstream 181455 9773311 ~ 9774463 (-) True LOC122323520
TU194851 lncRNA upstream 285596 9877452 ~ 9890523 (-) False G131944
TU194850 lncRNA upstream 294606 9886462 ~ 9890523 (-) True G131944
XM_043217087.1 mRNA downstream 6553 9580555 ~ 9584773 (-) False klhl38a
XM_043217086.1 mRNA downstream 6555 9579575 ~ 9584771 (-) True klhl38a
XM_043217358.1 mRNA downstream 63339 9521341 ~ 9527987 (-) True azin1b
XM_043217359.1 mRNA downstream 70187 9516444 ~ 9521139 (-) True rrm2b
XM_043217939.1 mRNA downstream 76308 9507489 ~ 9515018 (-) False mtdha
XM_043217982.1 mRNA upstream 39385 9631241 ~ 9638982 (-) True trib1
XM_043217018.1 mRNA upstream 67500 9659356 ~ 9664456 (-) False cibar1
XM_043218288.1 mRNA upstream 317248 9909104 ~ 9911742 (-) True lrrc69
XM_043218287.1 mRNA upstream 320509 9912365 ~ 9915059 (-) True otud6b
XM_043217545.1 mRNA upstream 338010 9929866 ~ 9984305 (-) True elmo1
TU194713 other downstream 281974 9308720 ~ 9309352 (-) True G131861
XR_006247085.1 other downstream 833653 8751369 ~ 8757673 (-) False hey1
XR_006247069.1 other downstream 852540 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247071.1 other downstream 1270425 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 1270441 8287294 ~ 8320885 (-) False trit1
XR_006246990.1 other upstream 68039 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 716102 10307958 ~ 10311928 (-) False elp2
TU195129 other upstream 716102 10307958 ~ 10310675 (-) False elp2
TU195233 other upstream 1578414 11170270 ~ 11170913 (-) True G132219
TU195332 other upstream 2134467 11726323 ~ 11737482 (-) False LOC122323871

Expression Profile